Plutella xylostella (diamondback moth): 105389151
Help
Entry
105389151 CDS
T03915
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03020
RNA polymerase
pxy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105389151
09124 Replication and repair
03420 Nucleotide excision repair
105389151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxy03021
]
105389151
03400 DNA repair and recombination proteins [BR:
pxy03400
]
105389151
Enzymes [BR:
pxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105389151
Transcription machinery [BR:
pxy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105389151
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105389151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
105389151
NCBI-ProteinID:
XP_011558528
UniProt:
A0ABQ7R072
LinkDB
All DBs
Position
5:complement(6534409..6545982)
Genome browser
AA seq
1904 aa
AA seq
DB search
MATTNDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKFGGLMDPRQGV
IDRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKVLRCVCFYCSKLLVSPTNP
KIKEVVMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKKGSGHGGCGHYQPS
IRRQGLDLTAEWKHVNEDSQEKKIIITAERVWEILKHITDEESFILGMDPKFARPDWMIV
TVLPVPPLSVRPAVVMFGAAKNQDDLTHKLADIIKSNNELLRNEQSGAATHILAENIRML
QFHVATFVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNAQYPGAKYIVRDNGERIDLR
FHPKTSDLHLQYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGNVNMIRTHSTHP
DEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNMPTIK
LSNKAFEKKFKFDPSNERYLKRIFNEDIIKELTESGYVIADLESEWEQLSKDRAALRQIF
PSGESKVVLPCNFKRMIWNVQKIFHINKRMPTDLSPIKVIQGVKDLLQKCIIVAGEDRLS
KQANANATLLFQCLVRSTLCTKFVSEEYRLSSEAFAWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNEESKFQ
DNEEETVDKMEDDMFLRCIEANMLSDMTLQGIESIAKVYMHLPQTEAKKRIIITEQGEFK
AIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKHGMEMGGLGVGMGVAGGMYFGVGTPSMT
PLMTPWSTQNTPGYGSSVWSPGQVGSSMTPGGPSFSPSGASDASGLSPAYSSAWSPQPGS
PGSPGPPLSPYASPAGASPSYSPTSPVYAPASPSLTPASPHYSPTSPNYSPTSPNYSPTS
PIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPAYSPTSPGYSPSSPSYSPTSPVYSPASHSYSPSSPNYTPTSP
VYSPTSPSYSPTSPSYSPASPRYSPSSTKYSPTSPNYSPTSPSVSGGSPNYSPTSPQYSP
TGSQYSPTSPAYSPSSPQHPESTRYSPSSPNYSPSSPNYSPSSPGYSPTSSKYSPTLPTY
TPTSPNYSPSSPAYSPQSSSGPTTYSPTSPTYSPTSPSCDESDD
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacgaatgactccaaggcgcctttgcgccaagtaaaaagagtacaatttggt
atattatcgccagatgaaatccgtcgtatgtcagtcacagaagggggcatccgcttcccg
gaaacgatggaaggtggacgacccaaattcgggggtctcatggaccctcgacaaggggtg
atagaccgcagctcccgttgccagacctgtgcggggaacatgacagaatgccctggacat
tttggacacattgatttagccaagccagtcttccacattggcttcattacaaagaccatc
aaagttctaagatgtgtttgtttttactgctcaaagctactagttagccccactaatcca
aaaatcaaagaagtagtcatgaaatcaaaaggacagcctcgtaaaaggttaacttatgtc
tatgatctgtgcaaaggaaaaaatatttgtgagggtggagaagacatggacataggcaag
gagggagaggagggtaagaagggctctgggcacggaggttgtgggcactaccagccctcc
atccggcgccagggtctggacctcacggctgaatggaaacacgtcaatgaagactcacaa
gaaaagaagataatcatcacagctgaacgagtgtgggaaatacttaaacatatcacagat
gaggagtctttcattcttggaatggatcctaaatttgctagaccagattggatgatagtg
acagtattgcctgtcccaccattgtcagtacgtccggcagttgttatgtttggggctgct
aaaaatcaagacgatttgacccacaaacttgctgacatcatcaaatccaataatgaattg
ctgagaaatgaacagtctggagccgccacccatatattagcagaaaatataagaatgcta
cagtttcatgttgcaacatttgtagataatgacatgcctggaatgcctaaagctatgcag
aaatcaggaaaaccactcaaagctatcaaagcacgtttaaaaggaaaggaaggaagaatc
agaggaaaccttatgggaaaacgtgttgacttctcggcgcgaactgtcatcaccccagac
cctaacctgcgtattgaccaagtaggagttccacgatccatcgcacagaacctgacattc
ccggagttagtaacacccttcaatatagacaggatgcaagagctagtgcgtcgtggtaac
gctcagtacccgggagccaagtacatcgtccgtgacaatggagagcgtatcgacttgcgt
ttccaccctaaaacatcagacttgcatttgcaatacggttacaaagtcgagcgacacttg
agagacgacgaccttgtcatcttcaaccgacagccaactctacacaaaatgagtatgatg
ggccacagagtaaaggttctgccgtggtctactttccgtatgaacctaagttgtacttct
ccctacaacgctgattttgacggtgacgaaatgaacttgcacgttccgcaatcgatggag
actcgtgctgaagtcgaaaacattcacattacaccgcgtcaaattatcacacctcaggct
aacaaacccgtcatgggtatcgtgcaggacacacttactgcggtacgaaagatgaccaaa
cgagatgtatttcttaccaaagaacaggttatgaaccttttgatgtttttgccgacatgg
gatggcaaaattcctcagccttgcatcttgaagccgcagcccctttggacaggaaaacag
atatttacgctgatcattcctggaaacgtcaacatgattcgaacacattccacacatcca
gatgaagaagatgatggtccatacaagtggatatctcccggagacaccaaagtagtagtg
gaacatggagagctgctcatgggtattctctgtaagaagtcacttggtgcgtcagccggg
tctctgctgcatatttgcatgttggagctgggacacgaaactgctggtagattctacgga
aatattcaaactgtcatcaacaactggctattattggagggtcactctatcggtattgga
gacacaattgccgatccccaaacataccaggaaattcagagggccattgtgaaggccaag
gatgatgtcatagaggtcattcaaaaggcccacaacatggagttggaacccacccccggt
aacacactgaggcagactttcgagaatcaagtgaatcgtattctgaacgacgctcgtgac
aagaccggagggtcagctaagaagtccctgactgagtacaataacctcaaggctatggtg
gtgtcaggttcaaagggttccaacattaacatttctcaggttattgcttgtgtaggccag
cagaacgttgaaggtaagagaattcctttcggttttcgtaagaggaccttgccccacttc
atcaaggacgattacggccctgagtcgagaggattcgtcgagaactcgtacctcgccggc
ctgacgccgtcagagttctacttccacgctatgggaggacgagaaggtcttatcgatact
gctgtcaaaactgccgaaactggttacatccagcgtcgtttgatcaaggctatggagtct
gtaatggttcactacgatggaaccgtgcgtaactcggtcggacaactcattcagttgaga
tacggcgaggacgggctggcgggagagacggtagagttccagaacatgcctacgatcaag
ctgtccaacaaagcctttgaaaagaagttcaaatttgacccgtcaaatgaaagatatttg
aagagaatattcaatgaagatatcatcaaggagttaacagaatctggttatgtgattgct
gatcttgagagtgagtgggaacagctcagcaaggatcgagcagctctgagacaaatcttc
ccgagtggtgaatcaaaggtggtactgccttgcaacttcaagaggatgatttggaatgta
caaaagattttccacattaacaagagaatgcccacggatttgagtccaattaaggttatt
cagggtgtcaaagacttgctacaaaaatgtataatcgtagctggtgaggatcgcttgtcc
aaacaagccaacgcgaacgccacattgctgttccagtgcctcgtcagatctacgctctgc
accaaattcgtgtccgaagagtacaggctctcgagtgaagcgtttgcatggttgatcgga
gaaatcgaaacgagattccagcaggctcaagtgaaccctggtgagatggtaggcgcgctg
gccgcccagtcgctcggagagcccgccactcaaatgacactgaacactttccatttcgct
ggtgtgtcgtccaagaacgtaaccctcggtgtgccgcgtctgaaggaaatcatcaacatc
tccaagaaacccaaggctccctctctaacagtgttcttgacgggaggagcggcccgtgac
gctgaaaaagccaagaatgtgttgtgtagactggaacacaccacgctgcggaaagtcacc
gcaaacacggccatctactacgaccctgacccacaaaacacagtgatcgctgaggatcaa
gagttcgtcaatgtttactatgaaatgcctgactttgacccgaccaagatctcaccatgg
ctgctgcgtattgaattggatcgtaagagaatgacagacaaaaagttgaccatggaacag
attgccgaaaagattaatgcaggtttcggcgatgacttgaactgtatctttaacgacgac
aacgctgagaaacttgtactccgtatcaggattatgaacaacgaggagagcaagttccag
gacaatgaagaagagaccgtggacaagatggaggatgacatgttcctgcggtgtattgag
gctaacatgctgtcagacatgacgctacagggcatagaatccatcgcgaaagtgtacatg
catttaccacagacggaggccaagaagcgtatcattattactgaacagggagagttcaag
gctatcgccgagtggctgctggaaacggacggtacttccctcatgaaggtactttctgag
cgtgacgtcgacccggtcaggacattcagtaacgacatttgcgagatcttccaagtactg
ggtatcgaggctgtccgtaagtccgtagagaaggaaatgaacgctgtgttgcagttctac
ggtctctacgtgaactaccgtcacttggctctgctttgtgacgtcatgaccgctaagggt
cacttgatggccatcacccgtcacggtatcaacaggcaggacaccggagcgctgatgaga
tgctccttcgaagaaaccgtcgatgtgttgttggacgcggccagtcacgctgaagtcgac
cctatgaggggagtgtctgagaacattattatgggacaactgccgcgcatgggaacaggt
tgtttcgatttgcttctcgacgcggagaagtgtaagcacggtatggagatgggtggtctg
ggcgtcggcatgggcgtcgctggcggcatgtacttcggagtaggcaccccgtccatgacg
ccgctcatgacgccgtggtctacgcagaacacgcccggatacggcagcagcgtatggtcg
cctggtcaagttggaagcagcatgacgcctggtggaccatcattctcgccgtccggagcg
tcagatgcgtctggtctatcgcctgcctacagcagcgcgtggtccccgcagcctggctcc
ccgggctccccggggcccccgctgtccccctacgcgtcccccgccggggcttccccctcc
tactcccctaccagccccgtgtacgcccccgcctctcccagcctcacccctgcgtcccca
cattactcccccacgagtccaaactactcgccaacatcgcccaattattcaccgacgtcg
cccatctattcgccaacgtcgcctagctactccccgacttcgcccgggtattcaccgacg
tcgccgtcgtactcgccgacgtctcccagctactccccgacttcgcccagttactctccg
actagcccggcctattcgccaacatcgccgagttactcgccaacatctccgagctactcg
cctacgagtccgtcgtactctccgaccagcccttcgtactcgcctactagtccggcatac
tctccgacatcgccaggctattcgccgtcctcgcctagttactccccgactagcccggta
tacagcccggcgtcgcacagctactccccgtcctcgcctaactacacgccgacatcgccg
gtgtactccccgacgagtccctcttactctccgacatcgccatcctactccccggcgtcg
ccaagatactccccgtcgtcgaccaagtattcaccgacgtctcccaactattcccccact
tcgccttcagtatccggcggcagtcccaactactcacccacaagtcctcagtactcgccc
accgggtcgcagtactcgcctactagcccggcctactcgccgtcgtccccgcaacacccg
gagagcacgcgctactccccatcctcgcctaactactctccatcttcacctaactactcc
ccgtcgtcgccaggttattccccgacttcgtccaagtattcccccaccctgccgacctac
acccccacttcgcccaactactccccgtcctcccctgcctactcccctcagtcgtcctct
gggccgactacctactctcccacttcacccacttactccccaacgtcgccgtcttgtgac
gaaagtgatgattag
DBGET
integrated database retrieval system
