Plutella xylostella (diamondback moth): 105392786
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Entry
105392786 CDS
T03915
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03013
Nucleocytoplasmic transport
pxy03015
mRNA surveillance pathway
pxy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105392786
09122 Translation
03013 Nucleocytoplasmic transport
105392786
03015 mRNA surveillance pathway
105392786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105392786
03041 Spliceosome [BR:
pxy03041
]
105392786
Enzymes [BR:
pxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105392786
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105392786
Spliceosome [BR:
pxy03041
]
Complex C
Other components
EJC/TREX
105392786
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105392786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105392786
NCBI-ProteinID:
XP_037974530
LinkDB
All DBs
Position
16:complement(1426302..1427944)
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQAEQQTTEGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQIEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHYILDECDKMLESLDMRRDVQEIFRNTPHSKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRSMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDEGDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgacgatcttttagactacgaggacgaagaacaggcggaacagcagacc
accgaaggggcaacagaagcggcgccaaagaaagaggttaaaggatcctacgtatccatc
cacagctccggtttcagggatttcctgctgaaacctgaaatcctacgtgccatcgtcgac
tgcggtttcgagcatccttctgaagtgcagcatgagtgcataccgcaggccgtacttggc
atggacattctctgccaggcgaagtccggtatgggcaagacggcggtgttcgtgctggcc
accctgcagcagatcgagccctcggagaaccacgtgtacgtgctggtgatgtgccacacg
cgcgagcttgccttccagatcagcaaggagtacgagcgcttctccaagtacatggccggc
gtccgagtgtcggtgttcttcggaggaatgccgatccagaaggacgaggaggtcctcaag
acggcctgcccgcacatcgtggtgggcacccccggcaggatcctcgcgctagtcaacagc
aaaaagctgaatctgaaacatctgaagcactacatcctcgacgagtgcgacaagatgctg
gagtccctcgacatgcgccgcgacgtgcaggagatcttccggaacaccccccacagcaag
caggtgatgatgttctccgctacactgagcaaggagatccggcctgtgtgtaaaaagttc
atgcaagaccctatggaggtgtatgtcgacgatgaagccaagctgaccctgcacggcctc
cagcaacactacgtcaagctaaaggagaatgagaagaacaaaaagctgtttgagttgcta
gatgtgctggagttcaaccaggttgtgatctttgtgaagtctgtacagcgctgtatagca
ttagctcaattgttaaccgaccagaacttcccggccatcggcatccaccggagcatgacc
caggacgaacgtctgtcaagataccagcagttcaaggacttccagaagcgtatccttgtt
gccaccaatctctttggaagaggaatggatattgaacgagtcaacattgtcttcaactac
gacatgcctgaggattccgacacctacctccacagagtggccagagcaggaaggtttggt
accaaaggtctagctatcacaatggtatcagatgaaggagatgcgaagatcctgaatgaa
gttcaagatcgctttgacgtcaacatcactgagctacctgaagaaatagagctgtcaaca
tacattgaaggacgatag
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