Plutella xylostella (diamondback moth): 105392955
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Entry
105392955 CDS
T03915
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03440
Homologous recombination
pxy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105392955
03450 Non-homologous end-joining
105392955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxy03032
]
105392955
03400 DNA repair and recombination proteins [BR:
pxy03400
]
105392955
DNA replication proteins [BR:
pxy03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105392955
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105392955
BRCA1-C complex
105392955
NHEJ (non-homologous end-joining)
MRX complex
105392955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
Rad50_zn_hook
AAA_29
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105392955
NCBI-ProteinID:
XP_048478308
LinkDB
All DBs
Position
8:complement(9094658..9125034)
Genome browser
AA seq
1303 aa
AA seq
DB search
MAGISSLSVRGIRSFGPEDNDEQRIAFDKPLTLILGQNGCGKTTIIECLRYAITGQTPPG
SRNECFVHDAKINRSTEVLGQVRLKFVNAKDKQLDVSRSMKVTALPKKKSTFKTLDSFLS
TVDEQGKTKDISSRCADLDFMIYEELGVSKAIINSVILCHQEDSGWPLDEGKKVKERFDE
IFDADKYSDCFDKLKKMRKEYTLSIKMLTQTVQHLSEKKEELDKKKLEVVNTESKISESE
LKVAELTNQMNPITTKINAIVTLQKNLVQFESKKEKIKTKLEHNKTLEEELTKAIKTMFE
GTTEELQENIKNYDATAKTKKKELADSHKKVFTFNKEEEAMANEMSSNEVKFNKLMLLES
QQQERFEKRNKLIVTTAKLADMEMAEITNDEEAEAGSQTMADKLKTLHTELKACRASADQ
EERALQAAVDESRDGVTRHKQKIVGKESEIQKVNKDVIRKNKEIAEVNDTKLKLDALEKK
MNTAEEEYKKQEAELNPEETQKQIEADEKVLEEHDKEYQELTAKVTKLQKESAKMKEKDI
IEEQLKTKQKQLEVLKNKHRSAIVELLGDMPEKDFALSVNKLEVENKTEVDAAKKKLKSK
TIEITRLEADRKHIREALTERRAELSTAEDKMYQACGTQTYPATLDKLNNAVEKLQEEQN
MLQSSLFIIGKYKEQLQENNSCPLCSRGFEAQNEVTELLSDLTTKVMNVPSKLEKVTEEL
QKASAEKDHLLTLKTLNEKITQLKEKDIPALETRLEEADKKIAELTASVEELTVGKAEPE
RKLATAKQISGQMPLLDKCISEVQAASKSFESIQAQCVDFDTTTNLDEAISKQEGLRTEI
SALRARVKTTQTRLNQHNKKLQKMAEAKNKLKEQMLNMQKKVQELVTLQETLKQLEENKE
KFAVELKELQEGITPLDAALAEAQKAKSEAVNRNRSQLDIKRSYINLVEASYEKVKTVVK
EIKKHIEQNVPQEMEKVKEANEAIKEKMKELAATRTEVTKKIDMLKDELAKQEIYKRDLE
DNLKLRNAQKECENCAKDLTEVEEKLSGVDVEMIKEKEPLIQQQTQLFKEKAETEGRLKE
LKENLKHLKVELLRSQNKNIETKYKEAFYDLEIMKAMDKDIRDYSVALERCVMEFHREKM
ENINLIIREMWRKIYRGNDIDYIEIKTESSMSSDSDRRKYDYRVVQCKSGVEIDMRGRCS
AGQRVLACLIIRLALAETFSSRFGILALDEPTTNLDDENIRSLCSALGEIVQERMRQKNF
MFIIITHDKEFIESLGNIEKVSHYYYISRNDDGKSRIKKVKFM
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatatcatccctctcagtgagaggcataagaagttttggtccagaagataat
gatgaacaaaggattgcttttgataagccgctaactttgattctcggtcaaaatggttgc
ggaaaaacaacaattatcgagtgtttgcgctatgcaattaccggccagacaccgcctggc
agtcggaatgagtgttttgtacatgatgctaaaattaacagaagtacagaagtgttgggg
caagttaggttgaagtttgtgaatgctaaagataagcaactggatgtatcaagatcaatg
aaagtgacagcccttcctaagaagaagtctacatttaaaaccctcgactccttcctgtcc
acggttgatgagcagggcaagactaaggatatatcttcaagatgtgcggatttagacttc
atgatttacgaagaacttggagtgtccaaggctatcataaactcggtgatcctatgccac
caagaggactcgggctggccgctggatgagggcaagaaggtgaaggagcggttcgacgag
atcttcgacgcggacaagtacagcgactgcttcgacaaactcaagaagatgaggaaggag
tacactttgagcatcaagatgttgactcaaactgttcagcatttatcagagaagaaggag
gaactagacaagaagaaactagaagttgtgaacaccgagtccaaaatatccgagtcggag
ttgaaggtggccgagctcaccaaccagatgaaccctatcaccaccaagataaacgccata
gtcacacttcaaaagaacctagtgcagtttgagtctaaaaaagaaaagatcaaaactaaa
ttggaacataacaaaactctagaagaagaactaacaaaggcaatcaaaaccatgtttgag
ggcacaacagaggaactacaagaaaatattaagaactacgacgcgacggccaagactaag
aagaaggagctggcggactcgcacaagaaggtcttcaccttcaacaaggaggaagaggct
atggccaacgaaatgtcttccaatgaggtgaagttcaacaagctgatgctgctggagagc
cagcagcaggagcgcttcgagaagcggaacaagctcatcgtcaccaccgccaagctcgct
gacatggagatggcagagatcacaaacgacgaagaagcggaagcaggctcacaaaccatg
gcggataagctgaagacccttcatacggagctgaaggcgtgccgcgcctccgccgaccag
gaggagagggcgctgcaagccgccgtcgacgagagccgggacggcgtcacccgccacaag
cagaagatcgtcggcaaagagagcgagatccagaaagtgaacaaggacgtgatccgcaag
aacaaggagatcgcggaggtcaacgacaccaagctcaagctcgacgcgttggagaagaag
atgaatactgctgaggaagagtacaagaagcaagaggcggaactcaaccccgaggagact
cagaagcagatcgaggcagatgagaaggtcttggaggaacatgataaggagtaccaggaa
ctcactgctaaggtaacaaaactccagaaagagagcgccaaaatgaaagagaaagacatc
atcgaggaacaactcaagaccaaacagaagcaactagaagtgctcaagaacaagcatcgt
tcggccattgtggagttactgggagacatgccagagaaagactttgcgttgtcggttaat
aagttggaggtcgagaacaagactgaagtggacgccgctaagaagaagctgaagagtaag
actattgagataactcgactagaagcggaccgcaagcacatccgcgaggcgctcacggag
cgacgcgccgagttgtccaccgccgaggacaagatgtaccaggcgtgcggcacacagacc
tacccggccacgctggacaaactcaacaacgccgtggagaaactgcaggaagaacaaaac
atgctgcagtcgtcgctgttcataatcggaaagtacaaggagcagctgcaggagaacaac
agctgcccgctgtgcagccgcgggtttgaagctcagaatgaggtgaccgagctactctca
gacctcacaacaaaagtaatgaacgtcccctcaaaactggagaaggtcacagaagaactc
cagaaggcttcagcggagaaggaccatctgctcacgctgaagacgctcaatgagaagatc
acgcaactgaaggagaaggatataccggcgttggagaccagactcgaggaggctgataag
aaaatcgcggagcttacagcatcagtggaagagctcacagttggtaaagccgagccggag
cgcaagctggccacggctaagcagatatctggacagatgccactgttggacaagtgcatc
agcgaggtgcaggctgctagcaagagtttcgagtccatccaagcgcaatgcgtcgacttc
gacacaacaaccaacctcgacgaagccatctccaagcaagaaggtctccgtaccgagatc
agtgccctccgagcccgggtcaagaccacgcagacgcggctcaaccagcacaacaagaag
ctgcagaagatggccgaggctaagaataagctgaaggagcagatgcttaatatgcagaag
aaggtgcaagagctagttacactacaagagacgctcaagcaactggaggaaaacaaggag
aagttcgcagtagaactaaaagaactacaagaaggtatcacgccgctcgacgccgcactc
gctgaggcgcagaaggctaagagcgaggctgttaataggaacaggagccaattagacata
aagagaagctacatcaacctcgtggaagcgtcttacgagaaagtgaagacggttgtgaaa
gaaatcaagaagcacatcgaacagaatgtccctcaagagatggagaaagtgaaagaggcg
aatgaagcaattaaagagaagatgaaagagctggctgcgaccaggactgaggttacgaag
aagattgatatgctgaaggatgaactggctaagcaagaaatctacaaacgcgacctagaa
gacaacctcaaactccgcaacgctcaaaaagaatgcgagaactgcgccaaagacctcacg
gaagtcgaggagaagctcagcggagtggacgtggagatgatcaaggagaaggagccgctg
atacagcagcagacgcagctcttcaaggagaaggccgagacggaaggacggttgaaggag
cttaaggaaaacctgaaacatctgaaggtagagctcctgcggtcacagaacaaaaacata
gagacgaaatacaaggaggcgttctacgaccttgaaataatgaaggcgatggacaaagat
attcgcgactactctgtggcgctggagcgatgcgtcatggagttccacagggagaagatg
gagaatatcaaccttattatcagagaaatgtggaggaaaatatacagagggaacgatatt
gattacatcgaaattaaaaccgaaagcagtatgtcctccgactcggatcgacgcaaatat
gattacagagtggtgcagtgcaagagcggcgtggagatcgacatgcgcgggcgctgcagc
gcggggcagcgcgtgctggcgtgcctcatcatccgcctggcgctggccgagaccttcagc
tccagattcggcatcctagccctcgacgagcccacgacaaacctggacgatgaaaacatc
cgcagtctctgttccgcactcggcgagatcgtgcaggagagaatgagacagaagaacttc
atgttcatcatcatcactcacgacaaggagttcatcgagagtctaggaaatattgagaag
gtctcccactattattatatctcgagaaatgatgacggcaagtcgagaattaagaaagta
aagtttatgtaa
DBGET
integrated database retrieval system
