Plutella xylostella (diamondback moth): 105394775
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Entry
105394775 CDS
T03915
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105394775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxy03041
]
105394775
03009 Ribosome biogenesis [BR:
pxy03009
]
105394775
Enzymes [BR:
pxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105394775
Spliceosome [BR:
pxy03041
]
Complex A
U1 snRNP components
U1 related factors
105394775
Complex B
105394775
Ribosome biogenesis [BR:
pxy03009
]
Eukaryotic type
Pre-60S particles
Helicases
105394775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
105394775
NCBI-ProteinID:
XP_037976662
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All DBs
Position
29:6179015..6183130
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AA seq
552 aa
AA seq
DB search
MSSGSWNNSRGSGGSKYGGGGGGGGGYGGGGGSRFGGGGGGGSRFGGGGGGGFGGKKDFT
GGQNMRRPNWDSVSLQPFNKNFYNPHPSVLSRSPYEVEQFRNQHEITISGVDIPPPIQQF
EEGNFPDYVMSSIKSQGYKEPTPIQAQGWPIAMSGLNLVGIAQTGSGKTLAYILPAIVHI
NNQQPIRRGDGPIALVLAPTRELAQQIQQVATDFGNASYVRNTCIFGGAPKREQARDLER
GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTV
MWSATWPKEVKKLAEDYLGDYVQINVGSMQLSANHNILQIIDVCQEHEKENKLNVLLQEI
GQSQEPGAKTIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDQVLHQFKQGRASI
LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKTTGTSYAFFTPSNSRQAK
DLVSVLQEANQTVNPQLQTMAERCGGGGGGWNRNRYGGGGGRGGGGGSFKRGSNFGRSNG
HGGGNHKKFNDY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggtagctggaataatagccgcggtagcggtggttccaaatatggcggcggc
ggtggtggtggaggcggatatggcggtggcggtggatctagattcggaggtggcggcggc
ggtggcagcaggttcggcggcggcggcggaggtggttttggaggcaagaaagacttcacc
ggaggccagaacatgaggcgccccaactgggattcagtgtccctgcagccattcaacaag
aacttctacaaccctcacccctcagtacttagccgttctccttatgaagtagaacaattc
cgaaaccaacatgaaattactattagcggagttgatatccctcctccaatccaacagttt
gaagagggcaacttccctgattatgttatgtccagtatcaaaagccaaggatacaaagaa
ccaacacctattcaagcacaaggctggcctattgccatgtctggattgaacttagttggt
attgcccaaactggatctggaaaaactttagcatacattctgcctgctattgttcacatc
aacaaccaacagcctattaggcgtggagatggccccatcgctcttgttctagcaccaacc
cgagagttggcccaacagatccaacaggttgccactgactttggcaatgcttcatacgtc
agaaacacatgcatatttggtggtgctcctaagagggaacaagctcgtgatcttgagagg
ggtgttgaaattgtcattgccactcctggcagactcattgatttcttggaaaagggaaca
accaaccttcagcgttgcacatacctggtgctcgatgaagctgatagaatgcttgacatg
ggatttgaaccccagatcaggaaaatcattgagcaaattcgtcctgacagacagactgtc
atgtggtcagctacatggcccaaagaagtaaagaaactagctgaagattaccttggtgac
tatgtacaaattaatgttggatccatgcaactgtctgctaaccacaacatccttcaaata
attgatgtttgtcaagaacatgaaaaagagaacaagttgaatgtactattacaagaaata
ggtcagagccaagaacctggtgccaaaaccatcatctttgtggagaccaaacggaaagtg
gagaatatcactagaaatatcagacggtatggatggccagctgtgtgcatgcacggagac
aagacccaacaggaaagagaccaagtcttacatcaattcaaacagggccgtgccagtatc
ctagttgccacagatgtggctgctcgaggacttgatgttgacggtattaaatatgtcata
aactttgactaccctaactcttctgaggactacattcaccgaattggtagaactgggcga
tcaaaaactacagggacctcgtatgctttcttcactccctccaactcccgccaagctaaa
gacctcgtctcagtgctgcaggaagctaaccaaacggtgaaccctcagctccaaacaatg
gcggagcgttgcggaggaggcggcggcggctggaacaggaaccggtacggcggaggcggc
ggccgtggtggaggcggcggctccttcaaacgcggatccaacttcggcagaagtaacgga
catggcggcggaaaccacaaaaaattcaatgactattaa
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