KEGG   Plutella xylostella (diamondback moth): 105395987
Entry
105395987         CDS       T03915                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pxy  Plutella xylostella (diamondback moth)
Pathway
pxy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105395987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxy03019]
    105395987
Messenger RNA biogenesis [BR:pxy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     105395987
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT PAM2
Other DBs
NCBI-GeneID: 105395987
NCBI-ProteinID: XP_037977851
LinkDB
Position
Z:complement(3514241..3529901)
AA seq 782 aa
MFSILNPEAPEFYPHLKAVTQNGFKTVSKSIQASNLLPSGQGYENFKTFTDFNILTRQLG
NNVVQQSNRIIATEDQFVLFKNEDTEHNIETLIDANDTIIDRLDSNLDVASGISKFKFAE
PSIASPQTADLTRVAPWNVSPVITKIKMGSATLIGAKNIPRPQIHFKDTIDNSESLWVPK
ISDKPNNIKPLALNILYNDNGEAVGYEHPYKVELDLYHPKAELLEASAAPAFPPPLEDTP
LTYIDQEQQMDQLCHHLLTVKEIAVDLEHHSYRTYQGITCLIQLTTEEGGDFIIDALACR
EHIHKLNQAFTDPRILKVFHGAEMDIIWLQRDFGVYVVGLFDTYQAAKALQLSGLSLKNL
LMRYCKVDADKKYQLADWRIRPLPEELMAYARVDTHYLLYMWRVMRNELLKQGTPLLMSV
FEQSRQICGSTYNKEVCHDESHLSLLQKSRRQFNSRQMAALKLLYKWRDSQARALDESTA
YLLPNHMLLALAEALPREVQGVHACCSPMPPFVKQNCITLHRMILTCRELPLEPQLYRMP
ASINAVLNHAGDRAGPAAPAMHDHTQDPDFRDDLPVALTMEEAFLVDPNAVSQFTTDLKL
FVPYYDDCGSYRFVSELNAEAKSFIPPFERYKRYRTLAQIEELKEFKEKEAKLAALGKGN
ELIKTEVLSKLVEPQVVPVAEKPTKQENDAQDTADQSESIKTGQRKRKISNETVEAKNEE
TDNNVKNKTDKQNQSKPKAPPQKDVKKFDYKNADYQKFFNDSEKMKQKFTKQSKPRFKKH
KK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgttttcaattttgaatcctgaggctccggaattttatccacacctaaaggcagtcact
cagaatgggtttaaaacagtcagcaagtcgatacaagcttccaatttacttcccagcggc
caaggatacgaaaatttcaaaacatttaccgattttaacatattgacacgacaactaggc
aacaatgtggtccaacaatccaacaggatcattgcgaccgaggaccagtttgtcctattc
aagaacgaagacacggaacacaatatcgaaactctaatcgatgctaacgacacgataata
gaccgactggactccaacttggacgtggcgtcgggcatatccaagttcaagttcgcggag
ccgagtatcgcgtccccgcagacggctgacctcaccagggtcgcgccatggaatgtcagc
cctgtcatcactaagatcaagatgggctcggctaccttaatcggcgccaagaatatacct
cgaccgcaaatacactttaaagatactattgacaattcggaaagcttatgggttcccaaa
atatctgataagccaaataacatcaaacctttggcgctcaacatcctttataatgacaat
ggagaggcggtcggttatgagcacccttacaaagtggagttggacttgtaccatcccaag
gccgagttgttggaggcgagcgccgcgccggcctttcctcctccgctcgaagacaccccg
ctcacttacatcgaccaggagcagcagatggaccagctctgccaccatctgctcactgtg
aaggagatagccgtggacttggaacatcattcgtacaggacttatcaaggtataacgtgc
ctgatacagttgactactgaggaggggggtgacttcatcatcgacgcgctggcttgtcgc
gaacacatccataagctcaaccaggcgtttactgaccctaggatattgaaggtatttcac
ggtgctgaaatggacatcatatggctacaaagggacttcggtgtatatgtggtgggacta
ttcgacacctaccaggcggccaaggcgttgcagctctctggactatctctcaagaacctg
ctcatgagatattgcaaagttgatgctgacaagaaatatcaactggcggactggcgtatt
cggccgctgcccgaagagctgatggcgtacgctcgcgtcgacacccactacctgctgtac
atgtggcgggtcatgcgcaacgaactgctcaaacagggtacacctttgttaatgagcgtc
ttcgaacaaagtcgtcagatttgtggatcgacctacaacaaggaggtgtgccacgacgag
agccacctgtccctgctgcagaagtctcgccggcagttcaactcgcgtcagatggcagca
ctgaagctgctctacaagtggcgagactcgcaggcgcgggccttggacgagagcactgcc
tacctgctcccgaaccacatgttgctggcgctggcggaggcgctgccgcgcgaggtgcag
ggcgtacacgcctgctgcagccccatgccgcccttcgtcaagcagaactgcatcacgctg
caccggatgatactcacgtgccgtgagctaccgttggagccgcaactctaccgtatgccg
gcgagcatcaacgcggtgctgaaccacgccggcgaccgcgcggggcccgccgcacccgca
atgcacgatcacactcaggacccggacttcagagacgatttgccggtggcgctgacgatg
gaggaggcattcttggtcgaccccaacgcagtgtcgcagttcactaccgacctgaagctg
tttgtgccatattacgatgactgtggctcttaccgctttgtgtctgagttaaacgcggag
gctaaaagtttcatccccccttttgaacgatacaaaagataccgaaccttagctcagatc
gaggaactcaaagagttcaaagaaaaggaggccaaattagcggcgctcggcaagggaaat
gagctgataaagacagaagttctctccaagttggtcgagccgcaagttgtgccggtcgca
gagaaaccaactaaacaagagaacgacgcgcaagataccgctgaccaatcagaatcaatc
aaaaccgggcaaagaaaaaggaagatttccaatgaaactgtagaagctaaaaacgaagaa
acagataataatgttaaaaataaaacagacaaacaaaatcaaagcaaacctaaagctccc
ccacagaaggatgtcaagaagtttgactacaagaacgctgactaccagaagttctttaac
gattctgagaagatgaaacagaagtttacaaaacaatctaaacctaggtttaaaaagcat
aagaaatga

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