Plutella xylostella (diamondback moth): 105395987
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Entry
105395987 CDS
T03915
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105395987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105395987
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105395987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
PAM2
Motif
Other DBs
NCBI-GeneID:
105395987
NCBI-ProteinID:
XP_037977851
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Position
Z:complement(3514241..3529901)
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AA seq
782 aa
AA seq
DB search
MFSILNPEAPEFYPHLKAVTQNGFKTVSKSIQASNLLPSGQGYENFKTFTDFNILTRQLG
NNVVQQSNRIIATEDQFVLFKNEDTEHNIETLIDANDTIIDRLDSNLDVASGISKFKFAE
PSIASPQTADLTRVAPWNVSPVITKIKMGSATLIGAKNIPRPQIHFKDTIDNSESLWVPK
ISDKPNNIKPLALNILYNDNGEAVGYEHPYKVELDLYHPKAELLEASAAPAFPPPLEDTP
LTYIDQEQQMDQLCHHLLTVKEIAVDLEHHSYRTYQGITCLIQLTTEEGGDFIIDALACR
EHIHKLNQAFTDPRILKVFHGAEMDIIWLQRDFGVYVVGLFDTYQAAKALQLSGLSLKNL
LMRYCKVDADKKYQLADWRIRPLPEELMAYARVDTHYLLYMWRVMRNELLKQGTPLLMSV
FEQSRQICGSTYNKEVCHDESHLSLLQKSRRQFNSRQMAALKLLYKWRDSQARALDESTA
YLLPNHMLLALAEALPREVQGVHACCSPMPPFVKQNCITLHRMILTCRELPLEPQLYRMP
ASINAVLNHAGDRAGPAAPAMHDHTQDPDFRDDLPVALTMEEAFLVDPNAVSQFTTDLKL
FVPYYDDCGSYRFVSELNAEAKSFIPPFERYKRYRTLAQIEELKEFKEKEAKLAALGKGN
ELIKTEVLSKLVEPQVVPVAEKPTKQENDAQDTADQSESIKTGQRKRKISNETVEAKNEE
TDNNVKNKTDKQNQSKPKAPPQKDVKKFDYKNADYQKFFNDSEKMKQKFTKQSKPRFKKH
KK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaattttgaatcctgaggctccggaattttatccacacctaaaggcagtcact
cagaatgggtttaaaacagtcagcaagtcgatacaagcttccaatttacttcccagcggc
caaggatacgaaaatttcaaaacatttaccgattttaacatattgacacgacaactaggc
aacaatgtggtccaacaatccaacaggatcattgcgaccgaggaccagtttgtcctattc
aagaacgaagacacggaacacaatatcgaaactctaatcgatgctaacgacacgataata
gaccgactggactccaacttggacgtggcgtcgggcatatccaagttcaagttcgcggag
ccgagtatcgcgtccccgcagacggctgacctcaccagggtcgcgccatggaatgtcagc
cctgtcatcactaagatcaagatgggctcggctaccttaatcggcgccaagaatatacct
cgaccgcaaatacactttaaagatactattgacaattcggaaagcttatgggttcccaaa
atatctgataagccaaataacatcaaacctttggcgctcaacatcctttataatgacaat
ggagaggcggtcggttatgagcacccttacaaagtggagttggacttgtaccatcccaag
gccgagttgttggaggcgagcgccgcgccggcctttcctcctccgctcgaagacaccccg
ctcacttacatcgaccaggagcagcagatggaccagctctgccaccatctgctcactgtg
aaggagatagccgtggacttggaacatcattcgtacaggacttatcaaggtataacgtgc
ctgatacagttgactactgaggaggggggtgacttcatcatcgacgcgctggcttgtcgc
gaacacatccataagctcaaccaggcgtttactgaccctaggatattgaaggtatttcac
ggtgctgaaatggacatcatatggctacaaagggacttcggtgtatatgtggtgggacta
ttcgacacctaccaggcggccaaggcgttgcagctctctggactatctctcaagaacctg
ctcatgagatattgcaaagttgatgctgacaagaaatatcaactggcggactggcgtatt
cggccgctgcccgaagagctgatggcgtacgctcgcgtcgacacccactacctgctgtac
atgtggcgggtcatgcgcaacgaactgctcaaacagggtacacctttgttaatgagcgtc
ttcgaacaaagtcgtcagatttgtggatcgacctacaacaaggaggtgtgccacgacgag
agccacctgtccctgctgcagaagtctcgccggcagttcaactcgcgtcagatggcagca
ctgaagctgctctacaagtggcgagactcgcaggcgcgggccttggacgagagcactgcc
tacctgctcccgaaccacatgttgctggcgctggcggaggcgctgccgcgcgaggtgcag
ggcgtacacgcctgctgcagccccatgccgcccttcgtcaagcagaactgcatcacgctg
caccggatgatactcacgtgccgtgagctaccgttggagccgcaactctaccgtatgccg
gcgagcatcaacgcggtgctgaaccacgccggcgaccgcgcggggcccgccgcacccgca
atgcacgatcacactcaggacccggacttcagagacgatttgccggtggcgctgacgatg
gaggaggcattcttggtcgaccccaacgcagtgtcgcagttcactaccgacctgaagctg
tttgtgccatattacgatgactgtggctcttaccgctttgtgtctgagttaaacgcggag
gctaaaagtttcatccccccttttgaacgatacaaaagataccgaaccttagctcagatc
gaggaactcaaagagttcaaagaaaaggaggccaaattagcggcgctcggcaagggaaat
gagctgataaagacagaagttctctccaagttggtcgagccgcaagttgtgccggtcgca
gagaaaccaactaaacaagagaacgacgcgcaagataccgctgaccaatcagaatcaatc
aaaaccgggcaaagaaaaaggaagatttccaatgaaactgtagaagctaaaaacgaagaa
acagataataatgttaaaaataaaacagacaaacaaaatcaaagcaaacctaaagctccc
ccacagaaggatgtcaagaagtttgactacaagaacgctgactaccagaagttctttaac
gattctgagaagatgaaacagaagtttacaaaacaatctaaacctaggtttaaaaagcat
aagaaatga
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