Plutella xylostella (diamondback moth): 105398273
Help
Entry
105398273 CDS
T03915
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105398273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105398273
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105398273
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
105398273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105398273
NCBI-ProteinID:
XP_048489251
LinkDB
All DBs
Position
5:complement(9423437..9425414)
Genome browser
AA seq
310 aa
AA seq
DB search
MAVKLLSETEKSFITYGVQDDFRSDGRSNIDYRPMELETDVVSHANGSARLRLANTDVLV
GVKTEVDTPSPDNPGAGKIEFFVDCSANATPEFEGRGGEQLANSISNMMQRAYHSSQAFN
LKQLCILDGKQCWKLYIDVLILECGGNLCDAVSLAVKAALFNTRIPFVKAALMDGGNVDL
QLSDDPYDCKLLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLVVGVTGNPKNYCTP
EESDKVAEGKAKCSAISMSGPGSVATKTLKDAINQGIVAAQSLDSALGHALLRERKENVT
LKKHSYGFLK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaaattactaagtgaaaccgaaaaatcatttataacatacggagttcaagat
gatttccgatcagacggccgatcaaatattgactatcggcctatggagcttgagactgac
gtggtgagccacgccaacggttcagcaagactgcgcctagccaacacggatgtgctcgtg
ggggtgaagactgaagttgacaccccaagcccagacaaccctggtgctgggaaaattgag
ttctttgttgactgctctgcaaatgcaactcctgagtttgaaggacggggcggggagcag
ctggccaatagcatatctaacatgatgcagagagcataccactcttcccaagcctttaat
ctaaagcaattgtgtatattggatggtaaacagtgctggaagctctatattgatgttttg
atactagaatgcggtggtaacctgtgtgatgcagtgtctttagctgtgaaagcagccttg
ttcaacactcgaataccatttgtgaaagcagccctcatggacggaggcaatgtggacctg
cagctgtctgatgacccctatgactgcaaactgctggatgtgggcagtgctcccttactt
gtgacactctgtaaaataggagagaaatgtgtggtagacccttcagcagaagaagaaagc
tgtagtgttatctcattggttgttggtgtgacgggcaacccaaagaactattgtacacca
gaggaatctgataaagtggcagagggcaaggcgaagtgcagtgccatcagcatgagcgga
cctggcagtgtggcgactaaaacactgaaagatgctattaaccagggaattgttgctgct
cagtcattagactcagccctaggacacgctcttctgagagaaaggaaagaaaatgtaaca
cttaaaaagcattcatatggatttttaaaatag
DBGET
integrated database retrieval system
