Pyrococcus yayanosii: PYCH_00280
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Entry
PYCH_00280 CDS
T01543
Name
(GenBank) putative transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pya
Pyrococcus yayanosii
Pathway
pya03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYCH_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pya03021
]
PYCH_00280
Transcription machinery [BR:
pya03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PYCH_00280
Prokaryotic type
Archaeal type
TFB
PYCH_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HARE-HTH
BRF2-like_C_cyclin_rpt
Sigma70_r4
Auto_anti-p27
HTH_Tnp_ISL3
RB_B
Ribosomal_S27e
DUF7577
Zn_ribbon_tTFIIB
DZR
DUF7564
Lar_restr_allev
Cas12f1-like_TNB
ORC6
Trm112p
YceG
Zn_ribbon_LysW
DUF7351
Zn_ribbon_IS1595
DUF5816
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AEH23741
UniProt:
F8AFD4
LinkDB
All DBs
Position
complement(25682..26650)
Genome browser
AA seq
322 aa
AA seq
DB search
MFTNSKISHTCPNCGSTNLVYDPYRGEIYCQNCGEIIQENIIDLRPDYRIFDSNQWKKRS
RIGAPESILLHDKGLSTDIGIDRSLTGLMREKMYRLRRWQSRLRVSDAAERNLAFALSEL
DRITAQLKLPKHVEEEAARLYREAVRRGLIRGRSIESVIAACVYAACRLLKVPRTLDEIS
DISRVDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRKAVEILEEA
YRKGLTSGKSPAGLVAAALYIASLLEGEKRTQREVAEIARVTEVTVRNRYKELVEKLGLK
LPSAFITNIAKAEVPPEATQQP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaattctaaaatctcccacacctgccccaactgcggctcgacaaacctcgtc
tacgatccctatcgcggagaaatatactgccaaaactgtggagaaataatacaggagaac
attatcgacctacgtcccgattatcggatttttgacagcaaccagtggaaaaaacgctcc
agaattggagctcctgagagtattcttcttcatgataagggtctctccacggacataggc
atagatcgctctctcacgggtttgatgagggagaagatgtataggcttaggaggtggcag
tctcgtttgagggttagtgatgctgcggagcgtaatcttgcttttgctcttagtgagctt
gataggattacggcccagcttaagcttccgaagcatgttgaggaggaggcggctaggctt
tatagggaggctgttaggagggggcttattaggggccgctcaattgagagtgttattgca
gcttgcgtttacgccgcctgcaggctcctaaaagtcccaagaaccctcgacgaaatcagc
gacatctcaagagttgataagaaggaaattgggagaagttatcgcttcatagcccgcaat
ttaaacctcacacccaagaaattattcgtgaaacccacggattacgtgaacaagtttgcc
gatgaactaggcttgagtgaaaaggttagaagaaaagccgtggaaattttggaagaagct
tataggaagggattgacaagcgggaaaagccccgctggtttagtagcagcagccctctac
atcgcctccctcctcgaaggagaaaaaagaacccaaagagaagtcgccgaaatagcaaga
gtaacagaagtaaccgtaagaaacagatacaaagaactagtagaaaaacttggacttaaa
ctaccctcagctttcataaccaacatagctaaagcagaagttccccctgaagccacccaa
cagccgtga
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