Pyrococcus yayanosii: PYCH_00760
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Entry
PYCH_00760 CDS
T01543
Name
(GenBank) cell division protein CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pya
Pyrococcus yayanosii
Pathway
pya04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PYCH_00760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pya03019
]
PYCH_00760
03009 Ribosome biogenesis [BR:
pya03009
]
PYCH_00760
04131 Membrane trafficking [BR:
pya04131
]
PYCH_00760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pya04147
]
PYCH_00760
Messenger RNA biogenesis [BR:
pya03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PYCH_00760
Ribosome biogenesis [BR:
pya03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PYCH_00760
Membrane trafficking [BR:
pya04131
]
SNARE
SNARE associated proteins
Others
PYCH_00760
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PYCH_00760
Exosome [BR:
pya04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PYCH_00760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
AAA_33
Vps4_C
nSTAND3
AAA_28
RNA_helicase
NPHP3_N
IstB_IS21
DUF815
AAA_24
AAA_18
Mg_chelatase
Sigma54_activat
Bac_DnaA
ABC_tran
AAA_7
Parvo_NS1
ATPase
AAA_17
TsaE
Zeta_toxin
SLFN-g3_helicase
PhoH
ATPase_2
AAA_3
NB-ARC
AAA_11
Zot
AAA_lid_PRS2_C
ARMT1-like_dom
DUF438
Motif
Other DBs
NCBI-ProteinID:
AEH23789
UniProt:
F8AIH2
LinkDB
All DBs
Position
72579..74969
Genome browser
AA seq
796 aa
AA seq
DB search
MADKKEIKLKVASAYQRDVGRGIVRIDRKSMREIGVEPGDIVEIIGTKNTAAIVWPAYPE
DEGLGIIRMDGTIRKNAGVGLGDEVTVRKAEVREAKKVVLAPTEPIRFGPDFVEWLHERL
IGRPVVRGDYIKIGVLGQELTFIVTATQPSGVVQIAEYTDFSISEKPVKEVAKAMTTGVT
YEDIGGLKDVIQKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAHFIAINGPEIMSKYYGESEERLRQVFKEAEENAPAIIFIDEIDAIAPKREETHGEVEK
RVVSQLLTLMDGLKSRGKVIVIAATNRPDAIDPALRRPGRFDREIEVGVPDKQGRKEILQ
IHTRGMPIEPDFRKGEVFEILEELRKEEKFRGIVEKAIGKVIGARDEEEVKKVLKEVSTE
LYDEVKARLIDRLLDELAEVTHGFVGADLAALAREAAMAALRRLIKEGKIDFEAETIPRE
VLEELKVTRKDFYEALKMVEPSALREVLIEVPNVRWDDIGGLEEVKQELREAVEWPLKHS
EAFRAFGITPPKGILLYGPPGTGKTLLAKAVATESQANFIAVRGPEILSKWVGESEKNIR
EIFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRIINQLLTEMDGIVENSGVVVIAAT
NRPDIIDPALLRPGRFDRLILVPAPDERARLEIFRVHTRNMPLAKDVNLEELAKRTEGYT
GADIAAVCREAAMIAMRKALEKGIIKEGMKAEEIRKVAKVTMKDFEEALKKIGPSVSKET
MEYYKRIQEQFKQARG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagaaggaaattaagctgaaagttgcttccgcttatcagagggatgttggc
agggggatagtcaggatagacaggaagtcgatgcgagagataggcgttgagcctggcgac
atcgtcgagataattggaaccaagaacaccgccgccatcgtttggccggcctatccggag
gacgaaggccttggcataattaggatggacggaaccatacgaaagaacgccggcgttggt
ctgggcgatgaggttacggtcaggaaggcagaggtcagggaggccaagaaggtcgttctc
gcgcccacggagcctattcgctttggtccagacttcgttgagtggctccacgagaggcta
ataggtaggccagtcgtcaggggcgactacatcaaaataggagttcttgggcaagagtta
acctttatcgtcacagccacacagcccagtggagtagtacagatagcggagtacactgat
ttctccataagcgagaagcctgttaaggaagttgccaaggcaatgaccacgggggtgacc
tacgaggacatcggtggactgaaggacgtcatacagaagatcagggaaatgatagagctc
ccgcttaagcatcctgagctcttcgagaagcttggtattgagcctcctaagggtgttctt
ctttatgggccgcctgggacgggtaaaactttgctcgctaaggctgtggcgaacgaggct
aatgcacactttattgccattaatgggccggaaatcatgagcaagtactatggtgaaagc
gaggaaagacttaggcaagtgttcaaagaggctgaagaaaacgctccagcgataatcttc
attgatgagatcgacgccattgctcctaagcgcgaggagacgcacggggaagtcgagaag
agagtggtctcgcagctcttaacccttatggatggtcttaagagtaggggtaaggttatt
gttattgctgctactaataggcctgatgctattgatcctgccttgaggaggccggggagg
tttgacagggaaatcgaagttggagtaccagacaaacaaggcagaaaagaaatactccaa
atccacaccagaggaatgcccatagaacccgacttcaggaaaggcgaggtatttgagatt
cttgaagagctcaggaaagaggagaagttcaggggcatcgtagagaaagccattgggaag
gttattggtgctagggacgaggaggaagtcaagaaggtccttaaggaggtcagtacagag
ctctacgatgaggttaaggcccgcctaattgacaggttgctcgacgagcttgccgaagtg
acccacggcttcgtcggggctgatttagccgccctcgcgagagaagcagctatggccgct
ctcaggaggctcataaaagagggcaagattgactttgaggccgagactattccgagggag
gttcttgaggagttgaaggtgacaaggaaggatttctatgaggcgttgaagatggttgag
ccgagtgcgctgagggaagtgctcattgaagtcccaaacgtccgctgggacgacataggc
ggcctagaggaagtcaaacaagagctaagggaagcagtagagtggccgcttaagcattca
gaagcgtttcgggcttttggcattactccgccgaagggcattctcctttatggcccgccg
ggaactggtaagacgctcctagccaaagccgtcgcaacagaaagccaagcaaacttcata
gccgtcaggggtcctgagatacttagcaagtgggtcggtgagagcgagaagaacatcagg
gagatcttcaggaaggctagacaggcagcaccgacggtgatattcatagatgaaatcgat
gcaatagccccgagaagaggaacagatgtgaacagggtaacagatagaataatcaaccag
ctgctgacggagatggacggaatagtggagaacagtggtgtagtagttatagccgcaacc
aacaggccggacataatagaccctgctttgttgaggcctggtaggttcgacaggctgata
cttgtgcccgcgcctgatgagagggctaggctggagatattcagggttcacacgaggaac
atgccactagccaaagacgtcaacctcgaagagctggccaagaggacagagggctacaca
ggagccgacatagctgcggtctgtagagaagcggcaatgatagcaatgaggaaggccttg
gagaagggaatcatcaaggagggcatgaaggcggaggagataaggaaggttgcgaaggtc
acgatgaaggacttcgaggaggccctaaagaagattggacccagtgtgagcaaggagacc
atggagtactacaagcgcatacaggagcagttcaagcaggctaggggctga
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