Pyrococcus yayanosii: PYCH_03900
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Entry
PYCH_03900 CDS
T01543
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
pya
Pyrococcus yayanosii
Pathway
pya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYCH_03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pya03021
]
PYCH_03900
Enzymes [BR:
pya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYCH_03900
Transcription machinery [BR:
pya03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PYCH_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEH24080
UniProt:
F8AH22
LinkDB
All DBs
Position
322222..324945
Genome browser
AA seq
907 aa
AA seq
DB search
MQSVKKVIGSIEFGILSPQEIRKMSAVEVTVPDTYDDDGYPIEGGVMDKRMGVIDPGLRC
ETCGARAGECPGHFGHIELARPVIHVGFAKTIHRILESTCRECGRIKLTDEEIEEYMKKL
ELAGNRRSEVNKILKEIHKKARERMVCPHCGAPQFPIKFEKPTIYWEIRKDEQGNEYRHR
MMPTEVRDRLEKIPDKDLPLLGLHPEKSRPEWMVLTVLPVPPVTVRPSITLETGIRAEDD
LTHKLVDIIRINNRLKQNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRT
LKTLAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPIEIAMELTVPEKVT
EFNIEKLRKMVLNGPEKYPGANYVIDPEGRRIRIMDSNRELLAERLDIGWTVERHLLDGD
IVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAE
ARILMEVQNHIISPRYGGPIIGGIQDHISGGYLLTREGAYFTREEVEQMLMFAGVDVKEL
PEPDKYENGKPLWSGKTIFSLLLPDDLTVWYRNKLCDEPERCEALEKLIEEKLMPDPEEV
RKLAYDGFVYIQNGKLLSGAIDKKAYGREDGIILDLIVREYGVERARQFLDQVTKLAIWV
ITHKGFTTAIDDEDLPQEAIDRIKEIIREAEERVERLIEAYRRGELEPLPGKTIEETLES
KIMAVLAEARDNAGSVAERYLGMDNHTVIMAKTGARGKILNITQMAALLGQQSIRGKRLY
RGYRGRVLTHFKPGDLGARARGFVVNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPNGVIVQFRYGEDGIDPMKSWGGKTVDVDRIIMRTLFK
MRVNGKA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggttaagaaggttatcgggagtatcgagtttggtattctttcccctcaagaa
atcaggaagatgagtgctgtcgaagtaacagttcccgacacttacgatgacgatggctat
cctatcgagggcggcgtgatggacaaaagaatgggcgtcatagatcccggccttaggtgc
gagacttgcggtgcaagggccggagaatgtccgggtcactttggccacatagagctggcc
cgtccggtaattcacgtgggtttcgccaaaaccatccaccgtatccttgagagcacttgt
cgcgagtgcggcaggataaagctcacggatgaggagatagaggaatatatgaagaagtta
gagctcgcaggcaacaggaggagcgaggtcaacaagatactcaaggagatacataagaag
gcgagggagagaatggtctgtccgcactgtggtgccccgcagtttcccatcaagtttgag
aagcccaccatatactgggagataaggaaggacgagcagggcaacgagtataggcacagg
atgatgcccacagaggtcagggacaggcttgagaagatacccgacaaggacctgccgctc
ctaggcctccaccccgaaaagtctaggcctgagtggatggttctcaccgtcctgcccgtt
cccccggtcaccgtaagaccctctataaccctcgagactggcattagggccgaggacgac
ctcacccataagcttgtcgacataataagaataaacaataggctcaagcagaacatcgag
gccggtgcaccacaactcatcatcgaagacctctgggatctccttcagtaccacgtcacc
acctacataaacaacgagacctccggcattccgccggccaagcacaagagcggaagaacc
ctcaagacccttgcccagaggcttaagggtaaggagggacgctttaggggcaacctcagc
ggtaagcgtgttaacttctcagcgagaaccgtcatcagccctgacccgatgataagcatt
aacgaggtcggcgtgccgatagagatagcgatggagctcaccgttcccgagaaggtcacg
gagttcaacatcgagaaactcaggaagatggtcctcaacgggcccgagaagtatccagga
gccaattatgtcattgaccctgagggaagaaggataagaattatggacagtaacagggag
ctccttgccgagaggctcgacataggctggacggtcgagaggcaccttcttgacggcgac
atagtgctgttcaaccgacaaccatctctccacaggatgagcataatggcccatagagtt
agggtcatgccctacaagacgtttaggctcaaccttgccgtttgcccgccttacaacgcc
gacttcgatggtgacgagatgaacttgcacgtgccgcagacggaggaggctcaggccgag
gccaggatactcatggaggttcagaatcacatcatatcgccgaggtacggtggcccgata
attggtggtatacaagatcacatctctggcggctacctgctgacgcgcgagggggcctac
ttcacgagggaagaggtagagcagatgttaatgtttgctggcgttgacgtgaaggaacta
cctgagcccgacaagtacgagaacggaaagcctctttggagtggaaagacaatattctcc
cttctccttccggatgacctgaccgtttggtataggaacaagctttgcgacgagcctgag
cgctgtgaagctctggagaagctcatagaggagaagctgatgcccgacccagaggaggtc
agaaagctagcctacgacggctttgtttacatccagaacggaaagcttctgagcggtgcc
atagacaagaaggcctacggaagggaggacggcataatcctcgacctcatagtaagggag
tacggcgttgaaagggccaggcagttccttgaccaggttaccaagcttgccatatgggtc
attacccacaagggtttcacaaccgcgatagacgatgaggaccttccgcaggaggctata
gataggataaaggagataatccgcgaggccgaggagagagttgagaggctcatagaggcc
tacagaaggggagagcttgagccactacccggtaagaccattgaagaaacgctagaaagc
aagataatggccgtacttgccgaggcccgtgacaacgccggtagcgtcgctgagaggtat
ctcggtatggacaaccacacggtcatcatggccaagacgggtgcgaggggtaagatactt
aacataactcagatggcggccctgcttggccagcagtccatccgtggcaagcgcctctac
cgtggctaccgcggaagggttttgactcacttcaagcctggcgatttgggagctagggct
aggggtttcgtcgtcaactcctacaagagcggacttaccccgcaggagtacttcttccac
gccatgggtggtagggaaggcctcgttgataccgcagtcagaacagcccaaagcggttac
atgcagcgccgtctgataaatgctctccaagaccttaaggtggactacgatggaaccgtc
agggatccaaacggcgtcatcgttcagttccgctatggcgaggatggtattgatcctatg
aagagctggggtggaaagacggttgacgtggacaggataattatgagaaccctcttcaag
atgagagtgaacgggaaggcgtga
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