Pyrococcus yayanosii: PYCH_03980
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Entry
PYCH_03980 CDS
T01543
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pya
Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pya03016
]
PYCH_03980
Enzymes [BR:
pya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PYCH_03980
Transfer RNA biogenesis [BR:
pya03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PYCH_03980
Prokaryotic type
PYCH_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEH24088
UniProt:
F8AH28
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All DBs
Position
329299..330540
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AA seq
413 aa
AA seq
DB search
MDFRELFRRFRHLSETPGIGGRIKVYPEDFIVREVLPKAAFRGPCLLFLLKKRNWETMAA
IKEIAKRLGIHYSEIGFAGTKDRHAVTYQYISICRPELKERVNSIKMKGVELRFVGKGRR
LKLGMLLGNRFLIRVRGPERPENLPEIIGELKEKGGFPNYFGPQRFGERRVVNHLVGKLL
LLGDFESAARLFLGYAEGDMEGDEARRNFWETGDVERALEEFPKFLRYERAMLYRYRETG
SWKKAFLVLPRPIARIFIHAYQAYLFNLYLSRRIEEGMSLAEAIPGDIVVQVKGGIPLRS
RTYRVTETNVDFVNEKIKAGEAMVTGPIFGLLMRRARGLPGRLETEILEGEGISLEAFKR
LPKPLREPGGRRELLIKPLHFAYKIEERSVLFRFFLPKGVYATSVLREIMKDH
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagggagctcttcagaaggttcaggcatcttagcgagactcctggaataggt
gggagaataaaggtctatcctgaggacttcatcgttagggaggtactaccaaaggcagcc
tttagaggcccctgccttctcttcctcctcaagaagcggaactgggagacgatggcggca
attaaggaaattgcgaagaggcttggtatccactactcggagataggctttgcgggaacg
aaggacaggcacgccgtcacataccagtacataagcatctgcaggcctgagctcaaggag
agagtcaactcaatcaagatgaagggcgttgagctgaggtttgtcggcaagggcagaagg
ctcaagcttggaatgctccttggtaaccgcttcctaatccgggttaggggtcctgagaga
cccgagaatcttccggagattataggggagctgaaggagaagggcggctttcccaactac
ttcggcccccagcggtttggggaaaggagggttgtaaatcatctcgtcgggaagctcctt
ctcctgggggacttcgagagcgccgcaaggctcttcctcggctacgccgaaggggacatg
gagggggatgaagctaggaggaacttttgggagacgggtgacgttgagagggcgttggag
gagtttcccaagttcctccgctacgaaagggccatgctttaccggtacagggagacaggc
agctggaagaaggccttcctcgtcctcccgagacctatcgcgaggatattcatccatgcc
tatcaagcgtatctcttcaacctttacctgagcaggcgcattgaggaagggatgtccctt
gcggaggccatacccggcgatatagttgttcaggtgaagggaggcatccccctgaggtct
aggacgtacagggttaccgagacaaacgtggacttcgtgaacgagaagataaaggctgga
gaagctatggtaaccggcccgatatttggactcttgatgcgccgggcccgcggtcttcct
ggccgtcttgagaccgaaatccttgagggggagggtataagcctcgaagccttcaaaaga
cttccgaagcctctaagagagccgggcgggaggagggagctcctcataaagcccctccac
tttgcctataagattgaggagagaagtgtcctcttcaggttcttcctgcccaagggtgtt
tacgctacgagcgtcctccgggaaatcatgaaggaccactaa
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