Pyrococcus yayanosii: PYCH_04020
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Entry
PYCH_04020 CDS
T01543
Name
(GenBank) RNA-binding protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
pya
Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pya03016
]
PYCH_04020
Enzymes [BR:
pya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PYCH_04020
Transfer RNA biogenesis [BR:
pya03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PYCH_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
THUMP
Motif
Other DBs
NCBI-ProteinID:
AEH24092
UniProt:
F8AH31
LinkDB
All DBs
Position
complement(332615..333829)
Genome browser
AA seq
404 aa
AA seq
DB search
MIIVKKAAEVLGKVELCNHCLGRLFAKLGKGSNEERGKAIRFVLNMERAASELPLLKEPK
RCELCGGVFERLEEYANRCLNAVEREGIEFDTFLVGSRFPKEVLEKEEEIWKRFGIEWGE
PINREFNRELGKLLEGLLGKKVNRERPDVVFIVEPASGRVELQVNPIYVYGRYRKLVRGI
PQTPLPGFRDSVASIICRAFSRAFGGKCVFKGAGREDVDVRMLGRGRPFIVEIKRPKRRK
ANLEKIAEDIAASGKVEVLEMKFVGPKEAEKVLTERHRKLYEALIFVREGVMPEEVRKVV
ETLRGAEIRQRTPRRVLNSRSDTVRVRRVYEAWGEPIDETHFRLRLLTDGGLYIKELISG
DGGRTRPSVAEILGKDAWCELLDVLDVLDGGDEIAEGDNWEVQG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgataatagtcaagaaggccgcggaagtattggggaaagttgagctctgcaaccactgc
ctcggcaggctcttcgcgaagcttggaaagggtagcaacgaggagagaggaaaggcgata
aggttcgtcctgaacatggagagggccgcgagcgaactacccttgctgaaggagccaaag
aggtgtgagctatgtggaggtgtcttcgagaggcttgaggaatacgcgaaccgttgtctc
aatgccgttgagagggagggaattgagtttgacacgtttctcgtgggctcaaggttccca
aaggaagtacttgagaaggaggaagaaatctggaaaaggttcggtatcgaatggggagaa
ccgataaacagggagttcaacagggagcttggaaagctcctcgaggggctcctcggcaag
aaagttaacagggagagacccgatgtagtattcatcgtcgagcctgcctctggacgggtg
gagctccaggtgaaccccatttacgtttacggtcgctaccgaaagctcgttcgaggaatt
ccgcagacgcccttacccggtttcagggacagcgtggcgtcgataatctgcagggccttc
tcaagggccttcgggggaaagtgtgtcttcaagggcgcgggaagggaagacgttgatgtg
agaatgcttggcaggggccgacccttcatcgtggaaattaagagacctaagaggaggaag
gctaacttagagaaaatcgcggaggatatcgcggcaagcgggaaggtcgaggttcttgag
atgaagttcgtggggccgaaggaagccgagaaagtcctgacggagagacacaggaagctc
tatgaggccctcatctttgtgagggaaggtgtaatgcccgaggaggttaggaaggtagtc
gagactctcagaggggcggagataaggcagagaactccccgaagggttctcaacagccgg
agcgatactgtgagagttaggagggtttacgaggcctggggcgagcccatagatgagacc
cacttccgcttgcggctcctgacggatgggggtctctacataaaggagctgatatcgggg
gacggggggaggacgaggccatctgttgcggagatcctcggtaaggacgcttggtgcgag
cttctcgacgtccttgacgtgctggatggaggtgatgaaattgctgaaggagataattgg
gaggttcaaggatga
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