Pyrococcus yayanosii: PYCH_06190
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Entry
PYCH_06190 CDS
T01543
Name
(GenBank) chromosome segregation protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pya
Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pya03400
]
PYCH_06190
DNA repair and recombination proteins [BR:
pya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PYCH_06190
Archaeal homologous recombinant proteins
PYCH_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
NPV_P10
AAA_13
Rad50_zn_hook
AAA_15
AAA_23
AAA_21
DUF1664
ABC_tran
BLOC1_2
CCDC39
AAA_29
SbcC_Walker_B
GAS
Phage_scaffold
AAA_27
Fib_alpha
T3SSipB
FtsK_SpoIIIE
HMBD
DUF7310
FlaC_arch
ABC_ATPase
DUF5679
Dynamin_N
DNA_ligase_ZBD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEH24307
UniProt:
F8AI78
LinkDB
All DBs
Position
518229..520883
Genome browser
AA seq
884 aa
AA seq
DB search
MRLEKVIIKDFRSHQLTAVDFTPGINLIIGQNGSGKSSILEAILVGLYWPSRPSELKKED
ILRVGGRGTEITVFFEVGGVKYQVHRKIHGSYAHVKYLDNGTWRTIEASGHNAVREWMNR
LISYDVFVNAVYIRQGEIEAILRDDVEREKVVRQVLGIEKLENAYSNLRAVLREIRRRIT
EAEDFLKKTEKVEETIVESERRLIEILSRINELSSKLPELRQELAVVERELKELDEKEKR
INGLKIELERKRGEMRELRAMEGELRKAIEEGKRKIEELKKRLKGLEELEERAKEFKELS
AFLENYRKRKAEIEREISAFEERLRAVEDRIMELEGKIERIAELENKLRELRERLKELEP
FKGKLDEREAIRRELENKRRKLRLSRKEIEKLREEIMRAKSERETLQKRLQELSKLRGEL
ESRMLDREKAIEELKRARGKCPVCGTELTEEHRQELIEKYTLEVSGMEERLREIEEEVGK
IRKKLREVERTLAREVELIKQEELLRQVEELEAKLKSFSPEIEEKAREFERVRDEIGRIE
GEVKGLREEASRLTALKKKRELLKEKLDGRKAWLNELEAELRKKGFGSEDELEKRLRELE
PMYKEYLELRALKGQLEREIKDVAEKEVKLRKVREDVERLRGEIDSIEEELRGLEKTYDP
VRHEEVRKRKERLAVELGKLENELKILEEERERVEKTLEALREQREERKKKMEELKRLKK
AELNAEELRKKIKMYKAAIRERALESVAEIASEIFEELTEGKYSGVVLKADENKLRLFVV
YEGKERPLSFLSGGERIALALAFRLALSMFLAGEMSLLILDEPTPFLDEERRRRLISIME
GYLRKIPQVIVVSHDEELKDAADRVIRVRLEDGVSRVSVEGVVS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgagaaggtaataatcaaggacttccgctctcaccagctgacagcggtagac
ttcactcccggaataaacctcataattggccagaacggcagcgggaagagctccatcctc
gaggcgattttggtaggcctttactggccatcgcgcccgagcgagctgaaaaaggaagac
atcctgagagtagggggcagaggaaccgagataacggtgttcttcgaggtcgggggtgtg
aaataccaggttcacaggaaaatacacggtagctacgcccacgtcaaatatctcgacaac
ggcacctggaggacgattgaggccagcggacacaatgccgtgagggagtggatgaaccgg
ctcatatcctacgacgtcttcgtgaacgccgtctacataaggcagggggagatagaggca
atactaagggacgacgtggagagggaaaaagttgtcaggcaggtgcttggaatagagaag
ctggagaacgcctacagcaacctgagggctgttctgagagagataaggcgtagaattacg
gaagctgaagacttcctcaaaaaaacggaaaaagtcgaggagactatcgtggagagcgag
aggaggctcattgaaatcctcagcaggattaacgagctctcctccaaactcccagagctc
aggcaggagctcgcggtggttgagagggagcttaaggagctcgacgagaaagaaaagaga
atcaacggtctgaagattgaactcgagaggaagaggggcgagatgagggagctcagggca
atggagggggagctcaggaaggccattgaagaaggaaaaaggaagatagaggagctcaaa
aaaaggctcaaaggtctcgaagaactcgaagagagggcaaaggaatttaaagagctttct
gcattcctcgagaattacaggaagaggaaggccgagatcgagagggaaataagtgcattt
gaggagaggctcagggcagttgaggacaggattatggagctcgaggggaagattgaaagg
attgcagagcttgagaataagttgagagagctcagggagaggctcaaggagcttgagccc
tttaaggggaagcttgatgagagagaagccatcagaagggagctcgaaaataaaagaaga
aagttgaggttgagcagaaaggagattgagaagctcagggaagaaattatgagggcaaaa
agtgagagagagacgcttcagaaaaggttgcaagagctgagcaagctgaggggcgagctc
gaaagcaggatgctcgatagggagaaggcaatcgaggagctcaagagggcgaggggtaag
tgccccgtctgcggtaccgagctgacggaggaacacaggcaggagctcatagagaagtac
actctggaagtctcggggatggaggagaggcttagggagattgaagaagaggttgggaag
ataaggaagaagctcagggaagtcgagaggacgctcgcgagggaggttgagctcataaag
caggaggagcttctgaggcaggtcgaggagctcgaggctaagctgaagtccttcagccct
gagatcgaggagaaggcaagggagttcgagagggttagggatgaaatcggcaggattgaa
ggtgaggttaagggcctgagggaagaagcgagcaggctcactgccctgaagaagaagcga
gagttattgaaggagaagctcgatggcagaaaagcctggcttaacgagcttgaagcagaa
ctcaggaagaagggatttgggagcgaggacgagcttgagaagaggttgagggagctcgag
ccgatgtacaaggaataccttgagttgagggccctgaagggacagctcgagagggagatt
aaggacgttgctgagaaggaagtcaagctaagaaaagtccgggaagatgtcgagagactg
aggggtgagatagacagtattgaggaggagcttaggggtcttgaaaaaacctatgatcca
gtgaggcatgaagaggtgagaaagaggaaggagaggctcgctgtggagctcggaaagctc
gagaacgagctgaagatactggaggaggagagggaaagagtcgagaagacccttgaagct
ctaagagagcagagggaggagagaaaaaagaagatggaggagctcaagaggctcaagaag
gccgagcttaacgccgaagagctgagaaagaagataaagatgtacaaggcagcgataagg
gagcgggccctggagagcgttgctgagatagcgagcgagatatttgaagagctgacggag
ggaaaatactccggagtagtcctgaaggcagatgaaaacaagctcaggctcttcgtggtt
tatgaggggaaagaaaggcccctgagcttcctcagcggcggtgaaaggatagccctcgcc
ttagccttccgcctcgccctctccatgttcctggctggcgagatgagccttctcatcctt
gacgagccaacgcccttcctagatgaggagaggcgcaggaggcttataagcataatggag
ggctacctcagaaagataccccaggtcatagtggtgtcccacgacgaggaactgaaagat
gcggcggatagggtcataagggttcggctcgaggacggtgtttccagggtgagcgtcgag
ggggtggtctcttga
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