Pyrococcus yayanosii: PYCH_07930
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Entry
PYCH_07930 CDS
T01543
Name
(GenBank) ski2-like helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
pya
Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pya03400
]
PYCH_07930
Enzymes [BR:
pya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYCH_07930
DNA repair and recombination proteins [BR:
pya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PYCH_07930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
Helicase_C
ResIII
HHH
DNA_pol_lambd_f
HHH_2
DEXQc_Suv3
HTH_61
HHH_8
Cdd1
RNA_pol_A_CTD
DSHCT
TMEM208_SND2
Motif
Other DBs
NCBI-ProteinID:
AEH24478
UniProt:
F8AJ27
LinkDB
All DBs
Position
complement(689309..691447)
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AA seq
712 aa
AA seq
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MKVDELPVDEKIKAVLKGRGIEELYPPQAEALRSEVLDGKNLLLAIPTASGKTLVAEIVM
VERILRGAGKAVYIVPLKALAEEKYREFKVWEALGLRVAVTTGDYDRKEEWLGRYDIIVA
TAEKFDSLLRHGPGWLREVGLLVADEIHLIGSPDRGTTLEMILTHMLGKAQIIGLSATVG
NPEELAEWLGARLVVSDWRPVRLRKGVFYDGIVRWEDGGVEKYPTGWESLTVDAVKKGKG
ALVFVNTRRSAERVAVELSKKMKRLLTKPELRELEKLAGELEDNPTNKRLREALRGGVAF
HHAGLGREERLLVEDAFRAGRIKVVVATPTLSAGVNMPAFRVVIRDTKRYSDFGWTDIPV
LEIQQMMGRAGRPKYDERGEAIIVAKDEDPEALMKRYIFGKPEKLFSMLSNESTFRGQVL
ALIVSFNVRSFRSLMEFLERTFYYHQRRSLEALEERAKGVVYFLLENEFIEMNLEGGFTP
LPLGIRTAQLYVDPLTAKLFKDHLEDIEKGPNPLGVFHLLALTPDMPPLPVRRKEFSDWV
DYAYEMEEYLYVEIPWDGYEMEKFLRALKTAKLLLDWINEVPEAKIMENYGIEPGDLHRL
VELADWLVYSMAEVARVLGMENSAKYLRDLQLRVRHGVREELLPLVKLPMIGRKRARALY
NAGFKTLEDIAKARPEDIKKVEGIGPKVLEALYSGLGVKVRIRKGTLDDFLK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagatgagcttcctgtggacgagaagattaaggccgtgctgaaggggaggggt
atagaagagctgtatcccccgcaggcagaggccctcagatcagaagttctcgatggaaag
aacctcctcctcgccataccgacggccagtggcaagaccctcgtcgccgagatagtcatg
gtggagaggatactcagaggggccggaaaggccgtttacatagtgccgctgaaggctctg
gccgaggagaagtacagagagttcaaggtctgggaagcccttggcctgagggtggccgtt
acgacgggagactatgataggaaagaggagtggcttggaaggtatgacataatcgtggcg
acggccgagaagttcgactcccttctcagacacgggccgggatggttgagggaagttgga
ctcctcgtcgccgatgagatacacctcataggctcacccgataggggaaccacgctcgag
atgatactcactcacatgcttggaaaggctcagataataggcctctccgcgaccgttggc
aatcctgaagagctggccgagtggctaggtgcgaggctcgtggtgagcgattggaggcct
gtgagactcaggaagggtgtgttctacgatggaatcgtgaggtgggaggacgggggcgtc
gagaagtatcctacgggatgggagtcccttaccgtggacgccgtcaagaaggggaaggga
gccctagtcttcgtgaacacgcggagaagtgccgaaagggttgcggtggagctatcgaag
aagatgaaacggctgttaacgaagcccgagcttagggagctggagaagcttgcgggggag
ctggaggataaccccacaaacaaaaggctgagagaggctctgcgcgggggagtcgcgttc
caccacgcgggccttggtcgcgaggaaaggctccttgtggaagacgccttcagggctggc
cggataaaggtcgtcgtcgcgacaccaacgctttctgctggagtaaatatgcctgctttc
cgcgtggtaatcagggatacgaagcgctactctgacttcggctggacggacattcccgtt
ctcgaaatccagcagatgatgggtagggctggcaggccgaagtatgatgagaggggcgaa
gctataatagtggcgaaggatgaggatcccgaggctcttatgaaaaggtacatcttcggg
aagcctgagaagctcttttcgatgctctcgaacgagtccaccttcaggggccaggtgtta
gctctcatagtgagcttcaacgtgaggagcttccgctctctcatggagttccttgagaga
accttctactaccatcagcggagaagcttagaggccttggaggagagggcgaagggtgtc
gtctacttccttctcgagaacgagttcatagagatgaatctggaggggggtttcacgcct
ctgccccttggcattagaaccgcacagctctacgttgatcccctgacggccaaactcttc
aaggatcatctggaggacatagagaaggggccgaacccccttggtgtctttcacctgctg
gcattaacccctgatatgcctcccctgcctgtaaggaggaaggagttctccgactgggta
gattacgcctatgaaatggaggagtacctatacgtggaaatcccctgggacgggtatgaa
atggagaagttcctaagggcccttaagacggcaaagctcctcctcgactggataaacgag
gtgcccgaggccaagattatggagaattacggcatagagccgggcgacctccacaggctc
gtcgagctcgccgattggctggtttattcgatggcggaagttgccagggtgctcgggatg
gagaatagcgccaaatacctcagggacctccagctgagggttagacatggcgttagggag
gagctcctgcctcttgtcaagctacccatgattggcaggaagagagcgagggccctctac
aatgcaggcttcaagacactggaagacatagcaaaggcaagaccagaagatatcaagaaa
gttgagggcataggacccaaagttctggaggcgctgtactccgggctgggcgttaaagtc
agaataaggaaggggacgctcgacgactttcttaaataa
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