Pyrococcus yayanosii: PYCH_12230
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Entry
PYCH_12230 CDS
T01543
Name
(GenBank) transcription initiation factor E subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pya
Pyrococcus yayanosii
Pathway
pya03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYCH_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pya03021
]
PYCH_12230
Transcription machinery [BR:
pya03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
PYCH_12230
Prokaryotic type
Archaeal type
TFE
PYCH_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7342
HTH_9
Sigma70_r3
TrmB
HTH_20
HTH_5
HTH_24
HTH_Crp_2
DUF2095
HTH_DeoR
Zn_ribbon_3
HTH_IclR
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
AEH24901
UniProt:
F8AF73
LinkDB
All DBs
Position
complement(1078666..1079220)
Genome browser
AA seq
184 aa
AA seq
DB search
MARRNKALIELARDIGGEEAVEVIKALEKKGEATDEELAEVTGIRVNTVRKILYALYDAK
LADFKRVRDDETGWYYYYWRIEIKRLPEIVRARKMQELERLKKMLQEETSEVYYHCGTPG
HPKLTFDEAFEYGFQCPICGEILQEYDNTQIVEELKRRIEELEIELGLRKPAKTSRGKKS
KKVS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggagaaacaaggcgctcatagaacttgcacgtgacataggtggagaggaagcc
gttgaggtaataaaagccctagagaaaaagggcgaggcaaccgatgaggaacttgctgag
gtgactggaatacgtgtcaataccgtccgcaagattctgtatgccctctacgatgcaaag
ctggctgattttaagcgggtaagggatgacgagactgggtggtattactattactggcgc
attgagataaagaggttgccggaaatcgtcagggcgagaaagatgcaggagctggaacgg
ctgaagaagatgttgcaagaggagacgagtgaagtctattatcactgcggtacacccggc
caccccaagttgaccttcgatgaggcctttgaatatggctttcagtgtccaatatgcggg
gagatacttcaggagtatgataacactcagatagtcgaggaactgaagaggaggatcgag
gagctagaaatagagcttggacttagaaaacctgcgaagacgagcagagggaagaaaagc
aaaaaagtaagctag
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integrated database retrieval system
