Pyrococcus yayanosii: PYCH_13450
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Entry
PYCH_13450 CDS
T01543
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pya
Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pya03016
]
PYCH_13450
Enzymes [BR:
pya01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PYCH_13450
Transfer RNA biogenesis [BR:
pya03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PYCH_13450
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AEH25017
UniProt:
F8AFP3
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All DBs
Position
1179126..1179653
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AA seq
175 aa
AA seq
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MEGELMKEPIEFRLSGDRVFSEREKAINQLHNNRGYGEVIEGKLFLSLVEAAYLLEKGKI
RVLDGDRELSLEELFDLGRKRDEDFDVKFLVYRDLRERGYIVKSGLKFGSHYRVYRRGSE
HSDWLVWVVRENAKLSPNDITARIRVAHGVRKSMVMAVVDEDGDVVYYRIEWVKF
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtggagggggaactaatgaaggagccaatagagttcaggctaagtggcgacagggtcttc
agcgagagagagaaggcgataaatcagctacacaacaaccgaggctacggggaggtcatc
gagggaaagctcttcctctcgctcgtcgaggcggcataccttttggagaaggggaagata
agagtactggatggagacagggagctctcgcttgaggagctctttgatcttggtcggaag
cgtgatgaggactttgacgtgaagtttctcgtttatagggatctaagggagaggggctac
atcgttaaatccggccttaagttcggctcccactaccgcgtttataggagaggatcagag
cactcggactggctcgtttgggtggtgcgggagaacgccaagctgagccctaatgacata
actgcccgtatcagagtggcccacggtgtcaggaagagcatggttatggctgtggttgac
gaggatggggatgtagtatattacagaatcgagtgggtgaagttttaa
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