Pyrococcus yayanosii: PYCH_17240
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Entry
PYCH_17240 CDS
T01543
Name
(GenBank) DNA repair and recombination protein RadA
KO
K04483
DNA repair protein RadA
Organism
pya
Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pya03400
]
PYCH_17240
DNA repair and recombination proteins [BR:
pya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PYCH_17240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
Intein_splicing
LAGLIDADG_3
HHH_5
RecA
HHH
Hom_end
LAGLIDADG_WhiA
ATPase
IMS_HHH_1
DNA_pol_lambd_f
AAA_25
Cdd1
HHH_2
IMS_HHH
PAXNEB
SAM_BAF
Motif
Other DBs
NCBI-ProteinID:
AEH25383
UniProt:
F8AHL2
LinkDB
All DBs
Position
1537120..1539474
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AA seq
784 aa
AA seq
DB search
MARKKVEDEVKELEEFEEMELDVMEEEEEPKKKKKGREIRTIEDLPGVGPATAEKLREAG
YDTLEAIAVASPIELKEVAGISEGAALRIIQAARKAANIGTFMRADEYLRKRQSIGRIST
GSKSLDKLLGGGIETQAITEVFGEFGSGKCFAKDTKIYYENDTLVHFESIEEMYQKYASI
NGEMPFDTGFAVPLDTVSVYTFDVRTGEVRRTKASYLYRERVRKILEVRLSKGRVLKITK
RHPVLVFRDGLQWVPAGELRPGDIVVGMRQIPANSIEMDASKAYFLGLFVAGGTSNPLSI
TIPSEELVKSVVKFIESHDGYKPKVEKRRGLYRVLLRKKTAEWLGKLLVSNPETKVIPGE
VLNADPESIAAFIAGYIDGDGHVTESTLEMVTKSRELADGLIFLFKRLGISPTLSEKLLD
GAVYYRIFITGEDRERLSEILKRAKLKAVRLHGERVGRYPPALAKYLSRLYSELRLLKGD
DELPWREDVWFTEKTLARIEDYFKEALQLLDRAEKASPEEIKHRREVAKKAIEMINLARK
LEFHEVLSVELVDYNDWVYDLVVPETHNFIAPNGLVLHNTQLAHTLAVMVQLPPEEGGLN
GSVIWIDTENTFRPERIREIAKSRGLDPDDVLKHIYVARAFNSNHQMLLVQQAEDKIKEL
LHTDKPVKLLIVDSLTSHFRSEYVGRGALAERQQKLAKHLADLHRLANLYEIAVFVTNQV
QARPDAFFGDPTRPIGGHILAHSATLRVYLRKGKGGKRVARLIDAPHLPEGEAVFRITEK
GIED
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagaaagaaagtcgaggatgaggtgaaggagctggaggagttcgaggagatggag
ctggatgtgatggaagaagaggaggagcctaagaagaaaaagaaggggagggagataagg
accatagaggacctgcccggcgttggccctgccactgccgagaagctcagggaggctggc
tacgacacccttgaagctatagcggttgcatctcccatagagctcaaggaggtggctggg
ataagcgagggtgctgccctcaggataatccaagccgcgaggaaggccgccaacatcggg
accttcatgagagccgacgagtacctgaggaagaggcagagcatagggagaatatccacg
ggaagcaagagcctcgacaagctccttggtggcgggatagagacacaggccataacggag
gtctttggagagttcggaagcggcaagtgcttcgccaaagacacaaagatctactacgag
aacgatacactggttcactttgagtcaatcgaggagatgtatcagaaatatgcatcaata
aacggcgagatgccttttgacaccggctttgctgtcccccttgacacggtcagcgtctat
acctttgacgtaaggacgggtgaagtcaggcgcaccaaggcctcttacctttaccgggag
agagttaggaagattcttgaggttcgtctctctaaaggtagggtgctaaagataaccaag
cggcaccctgttctcgtcttccgcgatggcctccagtgggttcctgctggagagcttagg
ccgggtgatatcgtcgttggcatgagacaaattcctgcgaactctattgagatggacgct
tcgaaggcctacttccttggtctcttcgttgccgggggcacctctaacccgttatccatt
actatcccttcagaggagctcgttaagagcgtggtcaagttcattgagagccatgacggc
tacaagccaaaagttgagaaacgtcgcggtctctacagggttctactccgtaagaaaacc
gctgaatggcttggaaagcttttggtgtccaacccggagaccaaggttattccgggggaa
gtgcttaacgccgaccccgaatcaattgccgccttcatagccggctatattgacggggat
ggacatgttactgagtctacactcgaaatggttacgaagagccgcgagctggctgatggg
ctaatcttcctcttcaagcgcctcggtatttccccaacgctatctgagaagcttttggac
ggtgctgtttactaccgcatctttatcactggcgaggacagagagaggctttcagaaatc
cttaagagggccaagctcaaagcagtaaggcttcatggcgagagagttggtaggtatcct
ccagctttggccaaatatttatcgagactctattccgagctccgcctcctaaagggagac
gatgagttaccatggcgggaagatgtttggttcaccgaaaaaactctggctcgcattgag
gactacttcaaggaggccctccagcttctcgatcgagccgagaaagcctcgcccgaggaa
ataaaacaccgcagagaagtcgccaagaaggccattgagatgataaacctcgcaagaaag
cttgagttccacgaggttctctcggttgagctcgttgactacaacgactgggtttacgac
cttgtcgtacctgaaacccataacttcatagcccctaacggtcttgtcctccacaacacc
cagctcgctcacaccctggccgttatggtccagctaccgcctgaggagggcggcctcaac
ggctccgttatctggatagacaccgagaacaccttcaggcccgagaggataagggagatt
gctaagagccgcggcctcgaccccgatgatgttctcaagcatatatacgtggccagggcc
ttcaacagtaaccatcagatgctcctcgtccagcaggctgaagataaaataaaggagctc
ctccacacggacaagcctgtaaagctactaatcgtagactcgctaacgagccatttccgc
tccgagtatgtgggcaggggggcccttgccgagagacagcagaagctggccaagcacctc
gccgaccttcacaggctggcgaacctctacgagatagcggtcttcgttacaaatcaggtg
caggcgaggcctgacgccttcttcggcgatccgacgcggcctataggtggccacatactt
gcccactcggcgacgctcagggtttacctgaggaagggcaagggaggaaagagggttgca
aggctaatcgatgccccccaccttccggagggtgaggcggtcttcaggataacggagaag
ggaatcgaggattag
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