KEGG   Pyrococcus kukulkanii: TQ32_01280
Entry
TQ32_01280        CDS       T04365                                 
Name
(GenBank) endonuclease
  KO
K02319  DNA polymerase, archaea type [EC:2.7.7.7]
Organism
pyc  Pyrococcus kukulkanii
Pathway
pyc03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TQ32_01280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyc03032]
    TQ32_01280
Enzymes [BR:pyc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TQ32_01280
DNA replication proteins [BR:pyc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    B-family DNA polymerases
     TQ32_01280
SSDB
Motif
Pfam: DNA_pol_B PI-TkoII_IV DNA_pol_B_exo1 Intein_splicing LAGLIDADG_3 DNA_pol_B_exo2 RNase_H_2 Hom_end FlgT_C
Other DBs
NCBI-ProteinID: AMM53281
UniProt: A0A127B7B1
LinkDB
Position
243051..246989
AA seq 1312 aa
MILDADYITEDGKPIIRIFKKENGEFKVEYDRNFRPYIYALLKDDSQIDEVRKITAERHG
KIVRIIDAEKVRKKFLGRPIEVWRLYFEHPQDVPAIRDKIREHSAVIDIFEYDIPFAKRY
LIDKGLIPMEGDEELKLLAFDIETLYHEGEEFAKGPIIMISYADEEEAKVITWKKIDLPY
VEVVSSEREMIKRFLKVIREKDPDVIITYNGDSFDLPYLVKRAEKLGIKLPLGRDGSEPK
MQRLGDMTAVEIKGRIHFDLYHVIRRTINLPTYTLEAVYEAIFGKPKEKVYAHEIAEAWE
TGKGLERVAKYSMEDAKVTYELGREFFPMEAQLSRLVGQPLWDVSRSSTGNLVEWYLLRK
AYERNELAPNKPDEREYERRLRESYAGGYVKEPEKGLWEGLVSLDFRSLYPSIIITHNVS
PDTLNREGCREYDVAPEVGHKFCKDFPGFIPSLLKRLLDERQEIKRKMKASKDPIEKKML
DYRQRAIKILANSILPEEWVPLIKNGKVKIFRIGDFVDGLMKANQGKVKKTGDTEVLEVA
GIHAFSFDRKSKKARVMAVKAVIRHRYSGNVYRIVLNSGRKITITEGHSLFVYRNGDLVE
ATGEDVKIGDLLAVPRSVNLPEKRERLNIVELLLNLSPEETEDIILTIPIKGRKNFFKGM
LRTLRWIFDEEKRVRTARRYLRHLENLGYIRLRKIGYDIIDKEGLEKYRTLYEKLVDVVR
YNGNKREYLVEFNAVRDVISLMPEEELKEWRIGTRNGFRMGTFVDINEDFAKLLGYYVSE
GSARKWKNQTGGWSYTVRLYNENDEVLDDMEHLAKKFFGKVKRGKNYVEIPKKMAYIIFE
SLCGTLAENKRVPEVIFTSSKGVRWAFLEGYFIGDGDVHPSKRVRLSTKSELLVNGLVLL
LNSLGVSAIKLGYDSGVYRVYVNEELKFTEYRKKKNVYYSHIVPKDILKETFGKVFQKNI
SYKKFRELVENGKLDREKAKRIEWLLNGDIVLDRVVEIKREYYDGYVYDLSVDEDENFLA
GFGFLYAHNSYYGYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVLYIDTD
GLYATIPGAKPEEIKKKALEFVDYINAKLPGLLELEYEGFYVRGFFVTKKKYALIDEEGK
IITRGLEIVRRDWSEIAKETQAKVLEAILKHGNVEEAVKIVKEVTEKLSKYEIPPEKLVI
YEQITRPLHEYKAIGPHVAVAKRLAARGVKVRPGMVIGYIVLRGDGPISKRAILAEEFDL
RKHKYDAEYYIENQVLPAVLRILEAFGYRKEDLRWQKTKQTGLTAWLNIKKK
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgatacttgacgctgactacatcaccgaggatgggaagccgattataaggattttcaag
aaagaaaacggcgagtttaaggttgagtacgacagaaactttagaccttacatttacgct
ctcctcaaagatgactcgcagattgatgaggttaggaagataaccgccgagaggcatggg
aagatagtgagaattatagatgccgaaaaggtaaggaagaagttcctggggaggccgatt
gaggtatggaggctgtactttgaacaccctcaggacgttcccgcaataagggataagata
agagagcattccgcggttattgacatctttgagtacgacattccgttcgcgaagaggtac
ctaatagacaaaggcctaattccaatggaaggcgatgaagagctcaagttgctcgcattt
gacatagaaaccctctatcacgaaggggaggagttcgcgaaggggcccattataatgata
agctatgctgatgaggaagaagccaaagtcataacgtggaaaaagatcgatctcccgtac
gtcgaggtagtttccagcgagagggagatgataaagcggttcctcaaggtgataagggag
aaagatcccgatgttataattacctacaacggcgattctttcgaccttccctatctagtt
aagagggccgaaaagctcgggataaagctacccctgggaagggacggtagtgagccaaag
atgcagaggcttggggatatgacagcggtggagataaagggaaggatacactttgacctc
taccacgtgattaggagaacgataaacctcccaacatacaccctcgaggcagtttatgag
gcaatcttcggaaagccaaaggagaaagtttacgctcacgagatagctgaggcctgggag
actggaaagggactggagagagttgcaaagtattcaatggaggatgcaaaggtaacgtac
gagctcggtagggagttcttcccaatggaggcccagctttcaaggttagtcggccagccc
ctgtgggatgtttctaggtcttcaactggcaacttggtggagtggtacctcctcaggaag
gcctacgagaggaatgaattggctccaaacaagccggatgagagggagtacgagagaagg
ctaagggagagctacgctgggggatacgttaaggagccggagaaagggctctgggagggg
ttagtttccctagatttcaggagcctgtacccctcgataataatcacccataacgtctca
ccggatacgctgaacagggaagggtgcagggaatacgatgtcgccccagaggttgggcac
aagttctgcaaggacttcccggggtttatccccagcctgctcaagaggttattggatgaa
aggcaagaaataaaaaggaagatgaaagcttctaaagacccaatcgagaagaagatgctt
gattacaggcaacgagctatcaaaatcctggcaaacagcattttaccggaagaatgggtt
ccactaattaaaaacggtaaagttaagatattccgcattggggacttcgttgatggactt
atgaaggcgaaccaaggaaaagtgaagaaaacgggggatacagaagttttggaggttgca
ggaattcatgcgttttcctttgacaggaagtccaagaaggcccgtgtaatggcagtgaaa
gccgtgataagacaccgttattccggaaatgtttatagaatagtcttaaactctggtaga
aaaataacaataacagaagggcatagcctatttgtctataggaacggggatctcgttgag
gcaactggggaggatgtcaaaattggggatcttcttgcagttccaagatcagtaaaccta
ccagagaaaagggaacgcttgaatattgttgaacttcttctgaatctctcaccggaagag
acagaagatataatacttacgattccaattaaaggcagaaagaacttcttcaagggaatg
ttgagaacattacgttggatttttgacgaggaaaagagagtaagaacagcaagacgctat
ctgagacaccttgaaaatctcggatacataaggttgaggaaaattggatacgacatcatt
gataaggaggggcttgagaaatatagaacgttgtacgagaaacttgttgatgttgtccgc
tataatggcaacaagagagagtatttagttgaatttaatgctgtccgggacgttatctca
ctaatgccagaggaagaactgaaggaatggcgtattggaaccagaaatggattcagaatg
ggtacgtttgtagatattaatgaagattttgccaagcttcttggctactatgtaagcgag
ggaagtgcaaggaagtggaagaatcaaactggaggttggagttacactgtgagattgtac
aacgagaacgatgaagttcttgacgacatggaacacttagccaagaagttttttgggaaa
gtcaaacgtggaaagaactatgttgagataccaaagaaaatggcttatatcatctttgag
agcctttgtgggactttggcagaaaacaaaagggttcctgaggtaatctttacctcatca
aagggcgttagatgggccttccttgagggttatttcatcggcgatggcgatgttcaccca
agcaagagggttcgcctatcaacgaagagcgagcttttagtaaatggtcttgttctccta
cttaactcccttggagtatctgccattaagcttggatacgatagtggagtctacagggtt
tatgtaaacgaggaacttaagtttacggaatacagaaagaaaaagaatgtatattactct
cacattgttccaaaggatattctcaaagaaacttttggtaaggtcttccagaaaaatata
agttacaagaaatttagagagcttgtagaaaatggaaaacttgacagggagaaagccaaa
cgcattgagtggttgcttaacggagatatagtcctagatagagtcgtagagattaagaga
gagtactatgatggttacgtttacgatctaagtgtcgatgaagatgagaatttccttgct
ggctttggattcctctatgcacataatagctattatgggtattatgggtacgcaaaagcc
cgttggtactgtaaggagtgcgcagagagcgttacggcctgggggagggagtatatagag
tttgtaaggaaggaactggaggaaaagttcgggttcaaagtcttatacatagacacagat
ggactctacgccacaattcctggggcaaaacccgaggagataaagaagaaagccctagag
ttcgtagattatataaacgccaagcttccagggctgttggagcttgagtacgagggcttc
tacgtgagagggttcttcgtgacgaagaagaagtatgcgttgatagatgaggaagggaag
ataatcactagggggcttgaaatagtcaggagggactggagcgaaatagccaaagaaacc
caagcaaaagtcctagaggctatcctaaagcatggcaacgttgaggaggcagtaaagata
gttaaggaggtaactgaaaagctgagcaagtacgaaatacctccagaaaagctagttatt
tacgagcagatcacgaggccccttcacgagtacaaggctataggtccgcacgttgccgtg
gcaaaaaggttagccgctagaggagtaaaggtgaggcctggcatggtgatagggtacata
gtgctgaggggagacgggccaataagcaagagggctatccttgcagaggagttcgatctc
aggaagcataagtatgacgctgagtattacatagaaaatcaggttttacctgccgttctt
agaatattagaggcctttgggtacaggaaagaagacctcaggtggcagaagactaaacag
acaggtcttacggcatggcttaacatcaagaagaagtaa

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