Pyrococcus kukulkanii: TQ32_04515
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Entry
TQ32_04515 CDS
T04365
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pyc
Pyrococcus kukulkanii
Pathway
pyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TQ32_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyc03019
]
TQ32_04515
Messenger RNA biogenesis [BR:
pyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TQ32_04515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Lactamase_B_3
Anti-Pycsar_Apyc1
DUF7654
BapA_N
MshEN
Lactamase_B_6
YceI
Motif
Other DBs
NCBI-ProteinID:
AMM54974
UniProt:
A0A127BCC0
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All DBs
Position
complement(855460..857001)
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AA seq
513 aa
AA seq
DB search
MKITIYDGADTIGGTKIHVEDGRNGVFLDFGMNFAKYSIYYEEFLRERSARGIYDIWMLN
LIPKLNIYRADLIPQDLSEIVRRYPAPRVDAVLISHAHLDHVGNIALLRENIPIVASPTT
LVILKALRDTSQNSHMGMELPYYSPKTPVNGNPNVLKSDRKGDYIARDMVVTEKLKHDIE
RFMRWRPELKLARSNRVRKIRVGQIVSVEEWDFPWEVKAYPVDHSIYGAVGYVIDGVIAY
TGDFRLHGERRALTKKFIKEAKNASVLITEGTRINREDFNVSEDEVYENALGIVEEANGL
VVADFSPRNFERLETFKKIAKKTGRELVITSKDAYFLHALTLAEGVNYLEGVRIYENLKA
DPRKWELWVFERYGELKVTPGEIRESPENYILCFSFYDMPHLLDVMPSGGVYIYSSSEAF
TEEQVFSFLRLWNWLQHFGFEVYGFKVLRDGRPVFEKGLHASGHASREDLIRVIDKVDPD
YIIPVHTENPEWFKGAFGSERVVILNNGESFEI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaccatttatgacggggccgatactatagggggtacaaaaatccacgttgaa
gacggcagaaatggagtatttttagacttcggcatgaactttgcgaaatactcaatatac
tacgaggaattccttagggaaaggtcggcccgcggaatctacgatatttggatgctgaac
ctaatccccaagctcaacatctacagagccgacttaatcccccaggatctaagcgagatc
gttaggagatatccagccccccgagtggatgcggtgttgataagccacgcacacctcgac
catgttggcaatatagccttgctgagggaaaatataccaatagtcgcttcgcctactacc
ctcgtcattctgaaggccctccgggacacctctcaaaactctcatatgggaatggagctc
ccctactacagcccgaaaactcctgtgaacggaaatccaaacgtcctaaagtcggacagg
aagggagattacatagcgagggacatggtagttacggaaaaactcaaacatgatatcgag
agattcatgaggtggaggccggagttaaagctggcgaggagcaacagggtgagaaagata
agagtcggacaaattgtcagcgttgaggaatgggacttcccctgggaggtaaaagcttac
cctgttgaccactctatctatggagccgtaggttacgtaatcgacggtgtcatagcttac
acgggagactttaggcttcacggggagcgcagggcactaacgaaaaagttcattaaggag
gccaaaaatgcgagcgttttgattacggagggcacgaggataaacagggaagacttcaac
gtctcagaggatgaggtttatgaaaacgccctcgggatagttgaagaggcaaacgggctc
gtggttgcagatttttcaccgaggaacttcgagaggctggagaccttcaagaagatcgcc
aaaaagaccgggagggagcttgtaataacgagcaaagacgcttatttcctccacgcctta
actctggctgaaggagtaaactacctcgagggtgttaggatttacgaaaacctaaaggca
gaccctagaaaatgggaactctgggtgttcgagaggtacggggagctgaaggtcactcct
ggggagataagagagagcccagagaactacatcctctgcttctctttctacgacatgcct
catctgctcgacgtcatgccaagtggtggagtttacatatactcctctagcgaggccttc
actgaggagcaggtgttcagcttcttaaggctctggaactggctccagcacttcgggttt
gaggtttacggtttcaaagttctaagagatggaaggccggtgtttgagaaggggcttcac
gcttccggacatgcttctagggaggatctaattagggtcattgataaggtggatcctgac
tatataattccagttcacacggagaaccctgagtggtttaaaggtgcgtttgggtcagaa
agagttgttattctgaataacggggaaagctttgagatttag
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