KEGG   Pyrococcus kukulkanii: TQ32_04780
Entry
TQ32_04780        CDS       T04365                                 
Name
(GenBank) DNA polymerase
  KO
K04802  proliferating cell nuclear antigen
Organism
pyc  Pyrococcus kukulkanii
Pathway
pyc03030  DNA replication
pyc03410  Base excision repair
pyc03420  Nucleotide excision repair
pyc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TQ32_04780
   03410 Base excision repair
    TQ32_04780
   03420 Nucleotide excision repair
    TQ32_04780
   03430 Mismatch repair
    TQ32_04780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pyc03032]
    TQ32_04780
   03400 DNA repair and recombination proteins [BR:pyc03400]
    TQ32_04780
DNA replication proteins [BR:pyc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TQ32_04780
DNA repair and recombination proteins [BR:pyc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TQ32_04780
   MMR (mismatch excision repair)
    Other MMR factors
     TQ32_04780
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    TQ32_04780
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Hus1 Rad9 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AMM53871
UniProt: A0A127B939
LinkDB
Position
906751..907500
AA seq 249 aa
MPFEIVFEGAKEFAQLIETASRLIDEAAFKVTEEGISMRAMDPSRVVLIDLNLPTSIFSK
YEVDGEETIGVNMDHLKKVLKRGKAKDTLILRKGEENFLEISLQGTATRTFRLPLIDVEE
IEVDLPDLPFTAKVVVLGEVLKEAVKDASLVSDSLKFIAKENEFTMKAEGETQEVEIRLT
LEDEGLLDLEVQEETKSAYGVSYLADMVKGIGKADEVTIKFGNEMPMQMEYYIRDEGRLI
FLLAPRVEE
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccatttgaaatagtctttgagggggctaaggagtttgcccagctcatagagacggca
agtaggctcatagacgaggcggcatttaaggttacggaggaaggaataagtatgagggcg
atggatccgagtagggttgttttaattgatcttaacctccccactagcattttcagcaag
tacgaggttgatggggaagagacgataggagtaaatatggatcacctcaaaaaggttctc
aagagaggaaaagccaaggacaccctcatcctgagaaagggagaagagaactttcttgag
ataagcttgcaagggactgcaacaaggacatttaggcttcccctcatcgatgttgaggag
atagaggttgatctcccagatcttcccttcacggctaaggtagtcgttttaggagaagtt
ctaaaggaggcagtcaaggatgcatcccttgtaagcgacagcctcaagttcatagccaag
gagaatgaattcacgatgaaagcggaaggagaaacccaggaggttgaaataaggctcacg
cttgaggatgaaggattgcttgacttggaggttcaagaggaaactaagagtgcctatggt
gtcagctacctagcagatatggtcaagggcattggaaaggctgacgaggtaacgataaag
tttggtaacgagatgccaatgcagatggagtactacataagagacgaaggtaggctgata
ttcctacttgcaccgagagttgaagagtga

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