Pyrococcus kukulkanii: TQ32_08845
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Entry
TQ32_08845 CDS
T04365
Name
(GenBank) tRNA-splicing ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pyc
Pyrococcus kukulkanii
Brite
KEGG Orthology (KO) [BR:
pyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyc03016
]
TQ32_08845
Enzymes [BR:
pyc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TQ32_08845
Transfer RNA biogenesis [BR:
pyc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TQ32_08845
Prokaryotic type
tRNA splicing ligases
TQ32_08845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AMM54574
UniProt:
A0A127BB65
LinkDB
All DBs
Position
1617388..1618833
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AA seq
481 aa
AA seq
DB search
MVVPLRRIDKIRWEIPKFDRRMRVPGRVYADEVLLEKMKKDRTLEQAANVAMLPGIYKYS
IVMPDGHQGYGFPIGGVAAFDVREGVISPGGIGYDINCGVRLIRTNLTEKEVRPKIKQLV
DTLFKNVPSGVGSQGRIRLHWTEIDDVLVDGAKWAVDHGYGWERDLERLEEGGRMEGADP
NAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKIFDPEIAKVYGLFEGQVVVMVHTGSRGL
GHQVASDYLRIMERAIRKYGIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMIT
HWVRESFQEVFRQDPEGDLGMDIVYDVAHNIGKVEEHEVDGRRVKVIVHRKGATRAFPPG
HEAVPRIYRDVGQPVLIPGSMGTASYVLAGTEGAMKETFGSTCHGAGRVLSRKAATRQYR
GDRIRNELLQRGIYVRAASMRVVAEEAPGAYKNVDNVVKVVSEAGIAKLVARLRPIGVAK
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgccattaaggagaattgataagatcagatgggaaatcccaaagtttgatagg
aggatgcgtgttcctggaagggtttatgctgatgaggttctccttgagaaaatgaagaag
gataggacacttgaacaggcagctaacgttgcaatgcttccaggcatatacaagtattca
atagtcatgcctgatggtcatcagggttatggtttccctattggaggagttgcggctttt
gacgtcagggaaggagtaataagccccggtggtatcggctacgatatcaactgcggcgtc
aggttgattagaacgaatttaacagaaaaggaagtgagaccaaagataaagcagcttgta
gatactttgtttaagaatgttccttctggcgttggtagtcagggtaggataagacttcac
tggacggagatagatgacgttcttgtggacggcgcaaagtgggcagttgatcacggctac
ggatgggagagggacctagaaaggctcgaagaaggagggagaatggaaggtgccgatcct
aacgcggtaagccagagagcgaagcagagaggtgctccccagttgggttctcttggctca
ggaaatcacttcctcgaagttcaagtggtggacaagatattcgatccagaaatagccaag
gtttacggcctctttgagggccaagtcgtggttatggttcacacgggttcgagaggtctc
gggcaccaagttgctagtgattacctcagaataatggagagggctattaggaagtacgga
ataccgtggccagacagggaactcgtcagtgttccattccagagcgaagaggggcagagg
tacttctccgcaatgaaagcggcagcaaactttgcctgggccaataggcagatgataact
cactgggtcagggagagcttccaggaagtctttaggcaagaccccgaaggagatcttgga
atggacattgtctatgacgttgcccacaacataggtaaggttgaggagcacgaggttgat
ggtaggagggtcaaggttatagttcacaggaaaggtgcaacgagggcattcccaccaggg
catgaggccgttccaaggatctatagggatgttggtcaacctgtccttatcccaggatca
atgggcaccgcgagttatgtcttagccggaaccgagggggcaatgaaagaaacctttggc
tcaacatgtcacggtgctggaagagtactcagtaggaaggccgcaacgaggcagtacagg
ggagatagaataaggaatgagctgcttcagaggggaatttacgtaagggctgcttcaatg
agggtggttgcggaggaggctccgggagcatacaagaatgttgacaacgttgtcaaagtt
gtcagtgaagcaggaatagcaaagctcgtcgctagattaaggcctataggagttgctaag
ggctga
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