Paracoccus yeei: A6J80_05360
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Entry
A6J80_05360 CDS
T04781
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pye
Paracoccus yeei
Pathway
pye03030
DNA replication
pye03410
Base excision repair
pye03420
Nucleotide excision repair
pye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6J80_05360
03410 Base excision repair
A6J80_05360
03420 Nucleotide excision repair
A6J80_05360
03440 Homologous recombination
A6J80_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pye03032
]
A6J80_05360
03400 DNA repair and recombination proteins [BR:
pye03400
]
A6J80_05360
Enzymes [BR:
pye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6J80_05360
DNA replication proteins [BR:
pye03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A6J80_05360
DNA repair and recombination proteins [BR:
pye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A6J80_05360
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6J80_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Polysacc_deac_2
Taq-exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ARC35889
UniProt:
A0A1V0GQC4
LinkDB
All DBs
Position
complement(593386..596190)
Genome browser
AA seq
934 aa
AA seq
DB search
MDGVFGKGHHLHLIDGSAFIFRAYHALPPLTRRSDGLPIGAVAGFCNMLWKYVQEARGAD
APTHAAVIFDHSSKTFRNEIYPLYKANRPEPPEDLRPQFPLTREATRAFNIACIETEGFE
ADDIIAALSCRARDAGGRVTIISSDKDLMQLVGDGVEMLDPIKGKAIGPEEVREKFGVGP
DRVVDIQALAGDAIDNVPGAPGIGIKTAAQLIEEYGDLETLLERASEIKQPKRRQTLIDH
AEQIRISKRLVQLDCDTPLEFGLETLEVKAPDPEALVEFLTRMEFRTLTNRVAERFGAAA
PPVAETVAATAPAAAALPPVDRSLYEVIRDEAALARWLEEIAEKGVVAFDTETTGLDEMR
ADLVGISLCTGPGRAAYLPLGHVGEGATGDLFGGPVLVAGQMDAYRALAMLKPILEDDAT
LKIGQNIKYDVKIMARHGIRVAPVDDTMLMSYALNAGTHNHGMDELAETYLGHKCVPIKE
LIGSGKAQIGFQQVPVDKAADYAAEDAEVTWRLWHRFRPELSRERVATAYEVMERPMVQV
LADMEMAGIRIDADHLRRMSGAFAQKMAALEAEIHDLAGGPFNVGSPKQLGEILFDRMGL
AGGKQGKTGAFSTSAEVLEDLAAEGHDLPARVLDWRAISKLKSTYTDALPLHVNPETGRV
HTSYSIAGAQTGRLASTEPNLQNIPVRTDEGRRIREAFVASPGHRLVSLDYSQIELRILA
HVAQIPALRQAFRDGIDIHAMTASQMFGVSVEGMDPMIRRRAKAINFGVIYGISGFGLAR
NLRIPRAEAQAFIDTYFERFPEIRAYMDRTVAEAKQDGHVRTLFGRRINTPGINQSGPAA
GGARRAAINAPIQGAAADIIRRAMIRMPEAIRDLPARMLLQVHDELVFEVEEAAVPELVA
RARAVMEGAADPAVRLDVPLIVDAGVGASWAEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggacggggttttcggcaagggccaccatctgcatctgatcgacggctcggccttcatc
tttcgggcctatcacgccttgccgccgctgacgcgccgctcggacgggctgcccatcggg
gcggtggccgggttctgcaacatgttgtggaaatatgtgcaggaggcgaggggggctgat
gcgccgacccatgcggcggtgatcttcgaccacagttccaagaccttccgcaacgagatc
tacccgctttacaaggccaatcgccccgagccgcccgaggatctgcgcccgcagttcccg
ctgacgcgcgaggccacgcgggccttcaacatcgcctgcatcgagaccgagggcttcgag
gccgacgacatcatcgccgccctgtcctgccgggcgcgggacgcgggcgggcgcgtcacc
atcatcagcagcgacaaggacctgatgcagctggtcggcgacggagtcgagatgctggac
ccgatcaagggcaaggccatcggtcccgaggaggtgcgcgagaagttcggcgtcggcccc
gaccgtgtggtcgacatccaggcgctggcaggcgacgccatcgacaacgttccgggcgcc
cccggcatcggcatcaagaccgccgcgcagttgatcgaggaatacggcgaccttgagacc
ctgttggagcgggcgagcgagatcaagcagcccaagcgccgtcagaccctgatcgaccat
gccgagcagatccgcatttccaagcggctggtgcagcttgactgcgacacgcccctggag
ttcgggctggagacgctggaggtcaaggcgcccgatcccgaggcgctggtcgaattcctg
acccgcatggaattccgcaccctgacgaaccgggtggccgagcggttcggcgcggcggcc
ccgcctgtcgccgagactgtggcggcgaccgcccccgcggcggcggccctgccgccggtg
gatcgcagcctttacgaggtgatccgggacgaggcggcgctggcgcgctggctggaggag
atcgccgagaagggcgtcgtggccttcgacaccgaaaccacgggcctggacgagatgcgg
gcggacctggtcggcatctcgctgtgcacggggccgggacgggcggcctatctgccgctg
ggccatgtcggcgagggcgcgacgggcgatctgttcggcggcccggtcctggtggcgggg
cagatggacgcctatcgcgcgctcgcgatgctgaagccgatactggaggacgatgccacg
ctgaagatcggccagaacatcaagtacgatgtcaagatcatggcccggcacggcatccgg
gtcgcgccggtcgacgacaccatgctgatgtcctatgcgctgaacgcgggcacccacaac
cacggcatggacgaactggccgagacctacctgggccacaaatgcgtgccgatcaaggag
ctgatcggttcgggcaaggcgcagatcggctttcagcaggtgccggtcgacaaggccgct
gactatgccgccgaggatgccgaggtgacatggcggctgtggcaccgctttcgccccgaa
ctgtcgcgcgaacgggtggccaccgcctatgaggtgatggagcggcccatggtccaggtc
ctggccgacatggagatggccggcatccgcatcgacgccgaccacctgcgccgcatgtcc
ggcgcctttgcccagaagatggccgcgctggaggccgagatccacgacctggccggcggt
cccttcaacgtcggcagtcccaagcagctgggcgagatcctgttcgaccgcatgggcctg
gccggcggcaagcagggcaagaccggcgccttttcgaccagcgccgaggtgctggaggac
ctggccgccgagggccacgacctgcccgcgcgcgtgctggactggcgcgcgatcagcaag
ctgaaatcgacctatacggacgcgctgcccctgcatgtgaaccccgagaccgggcgcgtc
cacaccagctattccatcgccggggcgcagaccgggcggctggcctcgaccgagccgaac
ctgcagaacatcccggtccggaccgacgaggggcggcgcatccgcgaagcctttgtcgca
agcccggggcaccggctggtgagtctggattacagccagatcgaattgcgcatcctggcg
catgtggcgcagatcccggccttgcgccaggcgtttcgcgacggcatcgacatccatgcc
atgaccgccagccagatgttcggcgtgtcggtcgagggcatggacccgatgatccgccgc
cgcgccaaggcgatcaacttcggcgtgatctatggcatttcgggctttggcctggcgcgc
aacctgcgcatcccgcgcgccgaggcgcaggccttcatcgacacctatttcgagcgtttc
ccggaaatccgcgcctatatggaccgcaccgtggccgaggccaagcaggacggccatgtg
cgcaccctgttcgggcggcgcatcaacacgccgggcatcaaccagagcggcccggccgcg
gggggtgcgcgccgcgccgcgatcaacgcgccgatccagggcgcggcggccgacatcatc
cgacgcgccatgatccggatgccggaggcgatccgcgacctgccggcgcggatgctgctg
caggtccatgacgaactggtctttgaggtcgaggaggctgcggtgcccgaactggtcgcg
cgcgcccgcgcggtgatggagggcgcggccgatcccgccgtgcgcctggacgtgccgctg
atcgtcgatgcgggtgtcggcgcgagctgggccgaggcgcattga
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