Paracoccus yeei: A6J80_06350
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Entry
A6J80_06350 CDS
T04781
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pye
Paracoccus yeei
Brite
KEGG Orthology (KO) [BR:
pye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pye03016
]
A6J80_06350 (rnd)
Enzymes [BR:
pye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6J80_06350 (rnd)
Transfer RNA biogenesis [BR:
pye03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6J80_06350 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARC38445
UniProt:
A0A1V0GX27
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All DBs
Position
complement(790860..792068)
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AA seq
402 aa
AA seq
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MPTASQPRPEDIQTITTTAELAAFCDLAKAQPYVTLDTEFLRERTYYSKLCLIQAALPPA
SGAKAEGGRAVLIDPIVGTDLSLEPLYDLFRHKATVKVFHAARQDLEIFYHDAGVLPDPL
FDTQIAAMVCGFGEQVGYETLVKKIARQPLDKSSRFTDWSHRPLSDAQAAYALADVTHLR
AIYEFLDGQLQKTGRAPWLQEEVAVLLNPETYITRPEEAWERVRTRSGSPRFLAVVRELA
RFRETYAQERDIPRSRVFKDDALVELASTKPLTEADLAKSRLLLRDARRGDIANGILAAV
KAGLEAKDLPRPAPEEPGRPGNAALADLLRVLLKAKSDETGVAPRLIASAAELDAIASGA
RDLPALTGWRAEVFGHDALRLASGEIALSAVGGAVRVVPVGG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgccagccaaccgcgccccgaagacatccagaccatcacgaccacggccgaa
ctggccgcattctgcgacctggccaaggcgcaaccctatgtcacgctcgacaccgaattc
ctgcgcgaacggacctattattccaagctgtgcctgatccaggccgcgctgccccccgca
tccggcgccaaggccgaaggcgggcgcgccgtgctgatcgacccgatcgtcggcaccgac
ctgtcgctggaaccgctctacgacctcttccgccacaaggccacggtcaaggtgttccac
gccgcccgccaggatctggagatcttctatcacgacgcgggcgtcctgcccgatccgctg
ttcgacacccagatcgccgccatggtctgcggcttcggcgaacaggtcggatacgagacg
ctggtgaaaaagatcgcgcgccagccgctggacaagtcctcgcgcttcaccgactggtcg
caccggccactgtcggacgcgcaggcggcctatgcgctggccgacgtgacgcatctgcgc
gccatctacgaattcctggacggccagttgcaaaagaccggtcgtgccccctggcttcag
gaagaggtcgcggtcctgctgaaccccgaaacctacatcacccgccccgaagaggcgtgg
gaacgggtgcgcacccgctcggggtcgccgcgtttcctggcggtggtgcgcgaactggcg
cggttccgcgaaacctatgcacaggaacgcgacattccccgttcgcgcgtgttcaaggac
gacgcgctggtggagctcgcctcgaccaagcccctgaccgaggccgacctggccaagtcg
cgcctgctgctgcgcgacgcgcgccgtggcgacatcgcgaacggcatcctcgccgccgtc
aaggccgggctcgaggccaaggacctgccccgtcccgcgcccgaggaacccggccgcccc
ggcaatgccgcgctggccgacctgctgcgcgtgctgctgaaggccaagtccgacgagacg
ggcgtcgcgccgcgcctgatcgcctcggcggccgagctggacgccatcgcatcgggcgcg
cgcgacctgccggctctgaccggctggcgggccgaggtctttggccacgacgcgctgcgg
ctggcctcgggggaaatcgcgctgtcggccgtaggcggcgcggtacgggtggtgccggtc
gggggctga
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