Paracoccus yeei: A6J80_06835
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Entry
A6J80_06835 CDS
T04781
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pye
Paracoccus yeei
Brite
KEGG Orthology (KO) [BR:
pye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pye03032
]
A6J80_06835 (topA)
03400 DNA repair and recombination proteins [BR:
pye03400
]
A6J80_06835 (topA)
Enzymes [BR:
pye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A6J80_06835 (topA)
DNA replication proteins [BR:
pye03032
]
Prokaryotic type
DNA Topoisomerases
A6J80_06835 (topA)
DNA repair and recombination proteins [BR:
pye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A6J80_06835 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ARC36131
UniProt:
A0A1V0GQL6
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All DBs
Position
complement(887740..890325)
Genome browser
AA seq
861 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASFGHVRDLPPKDGSVDPEADFAMKWEVAADSRK
HVKAIKDALASDPNLILATDPDREGEAISWHLLETLAPALKKGAEVSRVTFNAITKNAVT
EAMANPRQIDQPLVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVALRIIVDRE
MEIEAFKPREYWSVHARLATPRGDEFDATMTVFGGKKLERFDIADGETAQLAVAAIQSRD
LSVASVQAKPASRNPWPPFMTSTLQQEASRKLGLGARACMSAAQRLYEAGHITYMRTDGI
DMAPEAVMAARDAIKARFGAEYLPKSPRMYKNKAKNAQEAHECIRPTDMMLSPDRLPVAD
KDQKALYDLIWKRTIASQMESARMERTTVEIASPDGQVGLRATGQVMLFDGFLRVYDQGR
DDEDEDDGRRLPLIKEGEATEKRSVAPEQHFTQAPPRYTEATLVKRMEELGIGRPSTYAS
IVTTIQDRDYVRKEQNRLIPEDKGRLVTVFLQKYFPRYVSYDFTANLEGELDDISSGERA
YREVLRRFWRDFTAALEGTSELRIGEVLEAIDEALAPHLYPPRADGGDPRECPLCHKGRL
HLKTARSGGAFIGCTNYPECRFTRPISSPDAEIVGDAVLGEDNGDQISLKNGRFGPYVQR
GEATAENPKPPRASIPKGWDLASVDLDRALALLALPREIGPHPEDGVPVEAGIGRYGPYV
KHGAKYANLPDVDEVFTIGMNRAVEVLAQKATRGRAAPAAPLAELGEHPEGGPVQVLAGR
YGPYVKWGKVNATLPRDLEPGAVTLERALELIAEKAGKSGRKPAKKPAAKAEKAPAKKAS
AKKTAAKKPAATKKAGARKAE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgttgaatctccggccaaggccaagacgatcaataaatacctgggc
gacgactatacggttctggcgtccttcggccatgtccgcgacctgccgcccaaggatggc
agcgtcgatcccgaagcggatttcgccatgaaatgggaggttgcggcggatagccgcaag
cacgtcaaggcgatcaaggatgcgctggcaagcgacccgaacctgatcctggcgaccgac
cccgaccgcgagggcgaggcgatctcctggcacctgctggagacgctggcgccggccctg
aagaagggcgccgaggtcagccgcgtcaccttcaacgccatcaccaagaatgccgtgacc
gaggccatggccaacccgcgccagatcgaccagccgctggtcgatgcctatctggcgcgc
cgcgcgctggattacctcgtcggcttcaacctgtcgccggtcctgtggaggaagctgccc
ggcgccaagtcggccggccgggtgcagtcggtcgccctgcgcatcatcgtcgaccgcgag
atggagatcgaggccttcaagccccgcgaatactggtcggtgcatgcccgcctggccacc
ccgcgcggcgatgagttcgacgccaccatgactgtcttcggcggcaagaagctggaacgc
ttcgacatcgccgacggggaaaccgcgcagctggccgtggccgcgatccagtcgcgcgat
ctgtccgtcgccagcgtccaggccaagccggccagccgcaatccctggccgcccttcatg
acctcgaccctgcagcaggaagccagccgcaagctgggcctgggggcgcgggcctgcatg
tcggcggcgcagcggctctatgaggccggccacatcacctatatgcggaccgacggcatc
gacatggcgcccgaagcggtgatggccgcccgcgacgcgatcaaggcccgtttcggcgcg
gaatacctgccgaagagcccgcgcatgtacaagaacaaggccaagaacgcccaggaagcg
cacgagtgcatccgcccgaccgacatgatgctgtcgcctgacaggctgccggtcgcggac
aaggaccagaaggccctgtatgacctgatctggaagcgcaccattgccagccagatggaa
tcggcccgcatggagcgcaccacggtcgagatcgccagccccgacggccaggtcggcctg
cgcgccaccgggcaggtgatgctgttcgacggcttcctgcgggtctacgaccagggccgc
gacgacgaggacgaggatgacggccgccgcctgccgctgatcaaggaaggcgaggcgact
gaaaagcgcagcgttgcccccgagcagcatttcacacaggcacccccgcgctataccgag
gcgaccctggtcaagcgcatggaagaactgggcatcggccggccctcgacctatgccagc
atcgtgacgacgatccaggaccgcgattacgtccgcaaggaacagaaccgcctgatcccc
gaggacaagggccggctggtcacggtctttctgcagaaatacttcccgcgctatgtcagc
tacgactttaccgccaacctggaaggcgaacttgacgacatcagctcgggcgagcgcgcc
taccgcgaggtgctgcgccgcttctggcgggacttcaccgccgcgctggaaggcaccagc
gaattgcgcatcggcgaggtgctggaggccatcgacgaggccttggcgccgcatctctat
ccgccgcgcgcggacggcggcgacccgcgcgaatgcccgctctgccacaaggggcggctg
catctgaagacggcgcgctcgggcggggccttcatcggctgcaccaactaccccgagtgc
cgctttacccgtccgatcagcagccccgatgccgagattgtcggcgatgccgtgctgggc
gaggacaacggcgatcagatcagcctcaagaatggccgcttcggtccctatgtgcagcgc
ggcgaggccacggccgagaatcccaagccgccccgcgcctcgatccccaagggctgggat
ctggcctcggtcgatctggaccgggcgctggccctgctggccctgccgcgcgagatcggc
ccgcaccccgaggacggcgtgcccgtcgaggccgggatcggccgctacggcccctatgtg
aagcatggcgcgaaatacgcgaacctgcccgatgtggacgaagtcttcaccatcggcatg
aaccgcgccgtcgaggttctggcccagaaggcgacccgaggccgggcggccccggccgcg
cccctggccgaactgggcgagcatcccgaaggcggaccggttcaggttctggccggccgc
tacggcccctatgtcaaatggggcaaggtcaatgcgaccctgccgcgcgacctggagccc
ggggcggtgacgctggagcgggcgctggagctgatcgccgaaaaggccggcaagtcgggc
aggaaacctgcgaagaagcccgccgccaaggccgaaaaggcccccgccaagaaggcgtct
gcgaaaaaaaccgcggccaaaaaacctgccgcgaccaagaaggccggcgcccggaaggcc
gagtga
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