Paenibacillus yonginensis: AWM70_05095
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Entry
AWM70_05095 CDS
T04810
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
pyg
Paenibacillus yonginensis
Pathway
pyg02020
Two-component system
pyg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWM70_05095
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AWM70_05095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyg03021
]
AWM70_05095
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pyg02035
]
AWM70_05095
Transcription machinery [BR:
pyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWM70_05095
Bacterial motility proteins [BR:
pyg02035
]
Flagellar system
Flagellar assembly proteins
Stator
AWM70_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_16
GerE
7TMR-HDED
LXG
Motif
Other DBs
NCBI-ProteinID:
ANS74023
UniProt:
A0A1B1MXW1
LinkDB
All DBs
Position
1102435..1103223
Genome browser
AA seq
262 aa
AA seq
DB search
MSERKNSPLGYADLWERWKENGDLEAKKELIEKYLNIVDYVSGRLAVGLPRNISKDDLFS
NGVMGLMDAIEKFDYKRGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKRIEEGYQK
LEQKYLRSVTDEEMSQYLEVSEREFQQMLQDVAVMTLCSLEDPIREEESETRMSMLIDDK
AKNPDHKVREFFLQESLTKGIEKLTEKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRATLEKSRNLLMQED
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacgcaaaaattctcctctcggctacgccgatttgtgggagagatggaaggaa
aatggcgatctagaagcgaagaaagaactgatagaaaagtatttaaatatcgtagattat
gtatccggccgtttggctgttggtcttccgaggaatatttccaaggatgacctgttcagc
aacggagttatgggacttatggatgctattgaaaagtttgattataagagaggcctccag
tttgaaacttatgcttcatggagagtcagaggagccattttggacggtctccgtcaagga
gactgggttccacgttcggtcagagagaaagccaaaagaattgaagaaggttatcaaaag
ctggaacagaaatatttgcggagcgtcaccgatgaggaaatgagccagtacctggaagtt
tctgagcgggaatttcagcaaatgctccaggatgtagcggttatgacgctttgctccttg
gaggatcccattcgcgaggaagaatctgaaacccggatgtcgatgctgatcgacgataaa
gccaagaatccggatcataaagtacgcgaattttttttacaggaatcattaactaaagga
atcgagaagctgacggagaaagaacgtaccgttgtctctttattatattatgaggacctt
tccctgagtgaaattgccgaagtcatgtccctgtctccttctcggatttcacagcttcat
tcgaaagcgattttgcggcttcgggctactctggagaaaagcagaaatttgttgatgcag
gaggattaa
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