Paenibacillus yonginensis: AWM70_13345
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Entry
AWM70_13345 CDS
T04810
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pyg
Paenibacillus yonginensis
Pathway
pyg03410
Base excision repair
pyg03430
Mismatch repair
pyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWM70_13345
03430 Mismatch repair
AWM70_13345
03440 Homologous recombination
AWM70_13345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyg03400
]
AWM70_13345
DNA repair and recombination proteins [BR:
pyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AWM70_13345
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWM70_13345
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWM70_13345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Orthopox_B11R
Motif
Other DBs
NCBI-ProteinID:
ANS75469
UniProt:
A0A1B1N230
LinkDB
All DBs
Position
complement(2944156..2946555)
Genome browser
AA seq
799 aa
AA seq
DB search
MLHAHYRWSTLKPDQQAVARLTSEMKLPEMVASLLVTRGFDTAEKAEAFLLAGAEGLHDP
YSLHGMEEAVARIRQALANRERILIYGDYDADGVSSTSLMIRLMEHLQADFEWYIPHRSK
EGYGLHNHALEAASQRGVTLVVTVDTGISAVQQVAFAQTLGLDVVITDHHEPPAVLPEAY
ALVNPKLPFCPYPFKGLAGVGVAYKLACALVEQVPSSWTQLVALGTVADLMPLTGENRIL
VTQGLASMKEEPLTGMTALLQVSGSTVLNSTTIGFAMAPRINASGRLEHAKEAVELLITG
DPDKAAVLADRLDLLNRERQQIVDDIVQEAIKQLEENHPNGEIPSVVVVAGEGWNVGVVG
IVASKLVEKYYRPTLILGIDAETGMCKGSARSIPGYDMYEALTECADLLDHFGGHPSAAG
MSLHRDQLAAFSERLNAYADKVMEEEHYIPVLTADLECTLDEINVQTIELLSKLEPFGMN
NGCPRFLIQGTQILECRQMGKDRRHLKITLKQNGSVVEAVAFGKGSWAGLLTEGAVMNLV
AEASINEWNGSRKAQLMLMDGSVEHTQIFDYRGIKNPWHKLDELFDHWQTLPENNKGQAA
LVARPDSGTKLYRQLRELPVWVYDRNAGLIMESEEAAASCRPEEVTVLFIADAPETPEQL
NTLIASFGAVERIYLLHSAGEESERVESPTREQFKQVYALLRKAAGQAVPESKLIGWLSG
QTRLSSRMVTKTLAIFEELNFISRDRGMIRLNPAPAKRPLESSIRYNELSLLAEMEHYLL
FAGISELTEWILGRMKGVS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatgcccattatcgctggagcacacttaagcccgatcaacaggcggtagccagg
ctgacgtcggaaatgaagctgcccgaaatggtagcatccctgcttgtgacacgcgggttt
gatacagctgagaaagctgaagctttcttgctggccggggcagaaggactgcatgacccc
tacagtctccatggtatggaggaagcggtagcccgcatccggcaggcgctggcaaaccgg
gaacggattctaatctacggcgattatgatgctgacggcgtttcatccacatcgcttatg
atccgtttgatggaacatctgcaggctgatttcgaatggtatattccccatcgctccaaa
gaaggttacggcctgcataatcatgccctggaagcggcgtcgcagcgcggggtgactctt
gtcgtgacggtggacaccggaattagtgcggtacaacaggttgcctttgcccaaacattg
ggtttggatgtggtgattacggatcatcatgagcccccagccgttctgcccgaagcttat
gcgcttgtcaatcctaaactcccgttttgtccttaccctttcaaagggctggctggcgta
ggggtggcttacaagctggcttgtgctttggttgaacaggtgccttcttcatggactcag
ctggtagcactgggaacagtggcggacttaatgccattgacgggagagaaccggatcctc
gtcacgcaagggctggcttctatgaaggaggagccgcttaccggaatgaccgcgctgctc
caggtttctggaagcacggtcctgaattccactacgattggtttcgctatggctccgcga
atcaatgcaagcggacggctggagcatgccaaagaagcagtagagctgttaattacagga
gatccggataaagctgctgtccttgcagaccggcttgatttattgaaccgtgaacgacag
cagatcgtggatgatatcgttcaggaggccataaagcagcttgaagaaaatcatccgaac
ggggagattccatctgtcgtagtagtggctggtgagggctggaatgtcggggttgttggc
atcgtggcttcaaagcttgttgaaaaatattaccgtcccacgctcatcctcggcatcgac
gccgaaacgggcatgtgcaaaggctcagcccgttctattccgggttacgacatgtacgag
gcgctgactgaatgcgctgatcttctcgatcattttggaggtcatccttccgcagcgggg
atgtcgctgcatcgggatcagctggcagcgttcagtgaacgtcttaatgcctatgcggat
aaggttatggaagaagagcattacataccggtgctgacggcagatttggagtgtaccctt
gatgaaatcaatgtacaaacgattgagctgctgtccaagctggagcctttcgggatgaac
aatggctgcccgcgtttcttgattcagggaacacaaattctggaatgccgccaaatgggc
aaggaccgcaggcatttgaaaattacgctgaagcaaaacggaagcgtggtcgaagcagtt
gcttttggcaaaggttcttgggccgggctgctgacggaaggcgccgtaatgaatctggtg
gcggaagccagcatcaatgaatggaacggctcccgcaaagctcagttgatgctgatggac
ggctctgtggagcatacccaaatttttgattatcgggggatcaagaacccatggcataag
ctggatgaattatttgatcattggcagaccctgccggagaacaataaaggccaggccgca
ctggttgccagaccagacagcggaacaaagttatatagacaattgcgggaattgccagtt
tgggtatatgataggaacgctggtctgatcatggaatccgaggaagcggcggccagctgc
cggccggaggaagttacggtgctgtttatcgcagatgctcctgaaacgccggagcagctg
aacacgttgattgcttcctttggtgcagtggaacggatctatcttttgcattcggcagga
gaagaatcagaacgtgtggaaagcccgacacgggagcaatttaaacaggtgtatgcgctg
cttcgcaaagcggccgggcaagctgtgccggaatcgaagctgatcggctggctgtcgggt
caaacccgcctgtcgtcccggatggttacgaagacgctggcgatttttgaagaattgaac
tttatttcgagagaccggggaatgataagattaaatccggctccggccaaaagacctttg
gaatcgtccatacgctacaatgaattgagcctgctggctgagatggagcattatctgctc
ttcgccggcatttcagagctgacagaatggattctaggcagaatgaaaggcgtatcctga
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