Paenibacillus yonginensis: AWM70_16645
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Entry
AWM70_16645 CDS
T04810
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pyg
Paenibacillus yonginensis
Pathway
pyg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWM70_16645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyg03021
]
AWM70_16645
03400 DNA repair and recombination proteins [BR:
pyg03400
]
AWM70_16645
Enzymes [BR:
pyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWM70_16645
Transcription machinery [BR:
pyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWM70_16645
DNA repair and recombination proteins [BR:
pyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWM70_16645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANS76008
UniProt:
A0A1B1N3J5
LinkDB
All DBs
Position
complement(3632152..3635763)
Genome browser
AA seq
1203 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DLDVDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFKSSGNQPEWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLASGNIL
NPKDGKPVVTPSQDMVLGSFYLTMDNKEAKGSGMILGSVNEAVSAYQRGAASLHARVAIP
VKALNKVIFNEKQQDALLITTVGKIIFNEIFPETFPYINEATRDNLFNGTPEKYFIYEKG
ADVKALLDAAPVASAVGKEYLGSIIARCFETYHTTETSVILDKIKQLGFTYSTRAGVSIA
VSDVVVPEEKKQIMSDSDEKVRVVTNQYRRGLITDEERYDRVIDIWSKAKDQLTDVLMKS
MDRFNSIMLMVDSKARGNKSQITQLGGMRGLMATPSGRIYELPIKANFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGIVVTRIQDGKEIIEDL
FDRIEGRYCFETIRHPETGEIIIHRDELIDTDKANAIVNAGIEKLQIRSVLSCRARHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVIKEIREAKDRREIEVQGEAETKVYSVTYGSRLRVSEGMEIEA
GDELTDGSIDPKEILRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIKQMLRKIRI
VDAGDTQLLPGSFVDLYEYEVANKEAILSGKEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRNVEFDGPVDEETAEGLETV
SVE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgtcaacaacttcgagtttatgaaaattgggcttgcttccccagaaaaaatt
cgttcttggtcccgcggagaagttaagaaaccggaaacgattaactatcgtacacttaag
ccggaaaaagaagggctgttctgtgaaaagatttttggccctacaaaagactgggaatgt
cattgcggtaaatacaaacgtgtccgttataaaggcgttgtctgtgaccgctgtggtgta
gaagttacacgggccaaagtgcgccgtgaacgtatgggccacattgaattggcagctcct
gtatctcatatctggtatttcaaagggattcctagccgcatgggtctggctttggatatg
tcccctagatcgctggaagagatcatttattttgcatcttatgtagttaccgatcctggt
gatacgccgctggagaagaaacaacttttgtccgagaaagaataccgcagctaccgtgag
aaatacggctacgggttccaggcgggcatgggtgctgaagcggttaagaaattgttgcag
gatctggatgtcgataaagagctggagttcctgaaagaggaactccgcacggctcaagga
caacgtcggaaccgagcgatcaaacgcctcgaagtaattgaagcgttcaagagctccggc
aaccagccggaatggatgattctcgacgtgcttccggtcatccctccggaattgcgtccg
atggtacagctggacggcggacgttttgcaacgtctgacctgaacgatctgtaccgccgc
gtaatcaaccgtaacaaccgtttgaagcgtctgcttgatcttggcgctccggacatcatt
gttcagaacgagaaacggatgcttcaggaagcggttgacgctttgatcgacaacggccgc
cgcggccgtccggtaacaggtccgggcaaccgtcctttgaaatctctcagccatatgctg
aaaggtaaacaaggccgtttccgtcagaacctgctcggtaaacgggttgactattccggt
cgttccgttatcgtcgtaggtccttacctgaaaatgtatcaatgtggtcttcctaaagaa
atggctttggaattgtttaagccgtttgtcatgaaggagcttgtgaataaaggccttgct
cataacatcaagagtgcaaaacgcaaagtagaacgcgtgagcccagaagtttgggacgtt
ctcgaagaagtgatcaaggagcatccggttctgctgaaccgtgcccctacgcttcaccgt
ctcggtatccaggcgttcgaaccgattctggtcgaaggccgcgcgatccgtcttcacccg
ctcgtatgtacggcttataacgccgactttgacggtgaccaaatggcggtgcacgttcct
ttgtctgccgaagctcaagctgaagcacgtatcttgatgctggcttccggcaacattttg
aaccctaaagacggtaaaccggttgtaacgccgtcccaggatatggtccttggttccttc
tatctgactatggataacaaggaagccaaaggttccggcatgatcctgggcagtgtcaac
gaggcggtttcggcttaccagcgcggcgctgcttccctgcatgcccgtgttgcgattccg
gttaaagcgctgaacaaagtgatctttaacgagaaacagcaggatgccttgctgattaca
accgtgggtaaaattatctttaacgaaattttccctgaaacgttcccttacatcaatgaa
gctacccgggataacctgttcaacggtacacctgagaagtatttcatttatgagaagggt
gccgacgtcaaagcgctgctggatgcagctcctgtagccagcgccgtgggtaaagaatat
ctgggctcgatcattgcccgctgcttcgaaacttatcacacgacggaaacgtccgtgatt
ctcgataaaatcaaacagcttggcttcacttattccacacgcgccggtgtcagcatcgcg
gtatccgacgttgtggttccagaagagaagaaacaaatcatgtccgattcggatgaaaaa
gtccgggtggttacgaatcagtaccgccgtggtctgattacagacgaagaacggtatgac
cgcgttatcgacatctggtccaaagcgaaagaccagctgaccgacgtcctcatgaaatcg
atggaccgcttcaactccatcatgctcatggtcgactccaaagcgcggggtaacaaatcg
cagattacccagttgggcggcatgcggggtctgatggcaacaccatccggccggatctac
gaactgccgattaaagcgaacttccgtgaaggcctgaccgtcctcgagtactttatctcg
acgcacggtgcgcgtaaaggtctggcggataccgcgcttcgtaccgcggactccggttac
ctgactcgtcgtctggtagacgtggcgcaggacgttatcgtccgtgaagaggattgcgga
accgataaaggtatcgtggtaacacggatccaggacggtaaagaaatcatcgaagatctc
ttcgaccgtatcgaaggccgctattgcttcgaaaccatccgtcatccggaaaccggtgaa
atcatcattcatcgtgatgagctcatcgatacggataaagcgaatgcgattgttaatgca
ggcatcgagaagctgcagatccgctccgtgctcagctgccgcgctcgtcatggcgtatgt
aagaaatgttacggacgcaacctggcgacaggcaaacacgttgaaatcggtgaagcggtt
ggtatcatcgctgctcaatccatcggtgaaccgggaacccagcttaccatgcgtacgttc
cacaccggcggtgttgcgggcgacgacatcacgcaaggtcttccgcgtatccaggagctt
ttcgaagcccggaatccgaaaggtcaagcaaccatcagtgaaatcgacggcgtaatcaaa
gaaatccgtgaagctaaagatcgccgtgaaatcgaggtacaaggcgaagcggaaacaaaa
gtttactccgtaacctatggttcccgcctgcgcgtaagcgaaggcatggaaatcgaagcg
ggcgacgagctcaccgacggttccatcgaccctaaagaaattctgcgcatcaaaggcatc
cgcggcgtacagaactacatccttcaggaagttcaacgcgtataccggaaccagggtgta
gaaatcaacgacaaacacgtcgaagttatgatcaagcagatgctgcgtaagatccgcatc
gtagatgccggtgatacccaattgctgccaggatctttcgtcgacctgtatgaatatgaa
gtagcgaacaaagaagcgatcctgtccggcaaagagccggctgttgcgaagccggtattg
ctcggtatcaccaaagcgtcgctcgaaacggactccttcttgtctgcagcatccttccag
gagacgacacgtgtcctgactgatgcagcaatcaaaggtaaagtggataaattgctgggt
cttaaggaaaatgtgatcatcggtaagctgattccagcaggtaccggtatgaaccgttac
cggaatgtggaatttgacggaccggtggatgaagaaacagctgaaggcctggagactgta
tcggtagaataa
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