Phormidium yuhuli: NEA10_01200
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Entry
NEA10_01200 CDS
T08410
Name
(GenBank) DEAD/DEAH box helicase
Organism
pyh
Phormidium yuhuli
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
Flavi_DEAD
OTU1_UBXL
Motif
Other DBs
NCBI-ProteinID:
USR91389
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Position
complement(303558..306725)
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AA seq
1055 aa
AA seq
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MTQVLHGTWIPEKKDGFVQRGAFYIWIECQDKLNKQKDPGVHPFHLPAQGLGEFIHDDLG
IRDAPSQISYRLNPQYFLLPTRDEQPLLSWELATYLEAESEQAFEWQFWQILCYRLETIT
KITSSLTTEVCSAIATLNDLHFFCLHNSEDFQLGADLLFWYHYSQAFRDVILKDQYIPSF
KYHITQPKSRKKRKPFAIYAGWEIVSPHYESLIETYAPAMPLACASGWPTPPKRPEFHES
QTLLRHFSECVVTELASRFQTTQQLDKQLSQTVLYPCVTPSKLTDPLEPSEAFLETYETW
QAWRNKIQGSYQGLPFNLYLQLISPEDPDDPWPLNFLVSPKADPSLRVALADYWQGDSSQ
QQVLRQQLGDSFEADLLLNLGYAARMYPKLWQGLETPEPVGVNLTSQEAWEFLHETAWVL
EDADYKVLLPAWWTPSGRRRAKLRLKASSGSTSAGSNSGKSYLNAEQLVSYQYELAIGDE
PISREEWQKLVQAKQPLIQFRGEWVELDLAQMEKTLKFWDEQGKQEQSMTLMELFQRQAE
ADETLEVERDATLEQMLQQLTDKTSMTPVEELAGFEGTLRDYQKRGVAWLSFLEQVGLNG
CLADDMGLGKTVQVIARLVQERQENTPVQPTLLIAPTSVLGNWQKEVNRFAPQLRSQVHH
GANRVQEPKAFKQAAADVDVFITSYTLVRKDAKLFNGVNWQRIVLDEAQNIKNPKTAQTK
AILKLKAQHRMALTGTPVENRLMDLWSIFNFLNPGYLGKQNQFRKSFEVPIQRDGSLRQA
TTLRKLVEPFILRRLKTDKSIIKDLPDKLEQKVYCNLTKEQASLYQAVVEEVEASLEESE
GIKRKGLILSTLTRLKQICNHPRQFLQDESEFSPGRSHKLSRLLEMVDEVIAEGESLLIF
TQFGEIGDAMEQYLRHHCRYPTYYIHGATSRQGRDRMIQEFQNPETPPSIFILSLKAGGV
GITLTKANHVFHFDRWWNPAVENQATDRAFRIGQEKNVFVHKFVTLGSLEERIDQMIEDK
QKLAESVVGADESWLTELDNDTFKDLIALNRNAVL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggtcttacatggcacctggattcctgaaaaaaaggacggtttcgttcaacgc
ggagccttttacatctggattgaatgccaagacaaactcaataagcaaaaggaccccggc
gttcatcccttccacctcccggctcaaggtttgggggaatttatccatgacgacctgggc
attcgggatgccccgagccagattagttatcgcctgaaccctcaatactttttactcccc
acgcgcgatgagcaaccccttctttcttgggaattagccacctatttagaagcggaatcc
gagcaagcctttgagtggcaattttggcaaattctctgctaccgcctcgaaaccattact
aaaataacctcctctctgaccacagaagtttgtagtgcgatcgccaccctcaacgacctc
catttcttctgcctgcacaacagcgaggactttcaactgggagccgacttactcttttgg
tatcactacagccaagccttccgagacgttattctaaaagaccaatatatccccagtttt
aaatatcacattacccagcccaaaagccgcaaaaaacggaaaccctttgccatttatgcg
gggtgggaaattgtctcgccccactatgaaagcctcatcgagacctatgccccggccatg
cccttagcctgtgcctcgggctggccaactccccccaaacgtccagaatttcacgagtcc
caaaccctcttacgccatttcagcgaatgtgtggtgaccgagctggccagtcgctttcag
accacacagcaactggataagcagctctcacaaaccgtcttatacccctgtgtcaccccc
agtaaactcacagaccctcttgagccatcggaagcctttttagaaacctatgaaacctgg
caagcttggcgcaacaaaatccagggtagctatcaaggcttgccatttaatctttacctt
caactcatctcccccgaagacccagatgacccttggccgctcaattttttagtctccccc
aaagccgacccctccctgcgggtggccttagccgactattggcaaggggattcctcccag
caacaggttcttcgccagcaactaggggatagcttcgaggcagatttattactcaactta
ggctatgccgcgcggatgtatccgaaactttggcaaggcttagaaaccccagaacccgtt
ggtgtgaacctgacgagtcaggaggcctgggaatttttacatgaaaccgcctgggtgttg
gaagatgccgactacaaagtcttgcttcccgcctggtggacaccttcgggacggcgacgg
gccaaactgcgcctcaaagcctctagtggcagtacatctgccggcagtaatagcggcaaa
agctatctcaacgccgagcaactggtgagttatcagtatgagttagccattggcgatgaa
cccatcagtcgagaggaatggcaaaaactggtccaggccaaacaacccctgattcagttc
cgtggcgagtgggtggaactggacttggcacaaatggagaaaaccctgaagttttgggat
gaacaggggaaacaggagcaatccatgaccttaatggagttgtttcaacgccaagctgaa
gccgacgagaccttggaggtggaacgggatgccaccctagaacagatgttacagcaactc
accgacaaaacctcgatgacacctgtggaggagttagcagggtttgagggaaccttgaga
gactatcagaagcgaggggtggcttggttgagtttcctagaacaagtgggactcaatggc
tgtttagccgatgatatggggttagggaagacggttcaggtgattgcgcggttggttcag
gaacggcaagagaacaccccagtgcagccgacgctcttgattgcacccacctcggtgttg
gggaattggcagaaagaagtgaaccgatttgctccccaactgcggagtcaggtgcatcat
ggggccaatcgggttcaggagcctaaggcgtttaagcaggcggcggcggatgtggatgtg
ttcattacctcctataccctggtgcgcaaggatgccaagctatttaatggggtcaattgg
cagcgtattgtcttagatgaagcccaaaatatcaagaatccgaagacggctcaaacgaag
gccattttgaagcttaaggcgcaacatcgaatggcgttgacgggaactccggtggaaaac
cgtctgatggatttatggtcgatttttaatttcctcaatcctggttatttagggaaacaa
aatcagtttcgtaagtcgtttgaggtgccgattcaacgggatgggagtctgcggcaagcc
acgaccttgaggaagttggtggaaccgtttattttgcgccggctgaaaacggacaagtcg
attattaaggatttgccggataaactggagcagaaagtctactgtaatttgaccaaggaa
caggcatcgttatatcaggcggttgtggaagaggtggaagctagtttagaggaaagtgag
gggattaaacgtaagggattgattttatcaaccttgacccggctcaaacagatttgtaat
catcctcggcaatttttgcaagatgagagtgagtttagtccggggcgatcgcacaaactc
tctcgtttacttgagatggtggatgaagtgattgctgaaggggagagtttactgattttt
acccagtttggtgagattggtgatgccatggaacagtatttgcgtcatcactgtcgctat
cccacctattatatccatggggctaccagtcgccaggggcgcgatcgcatgattcaagag
ttccaaaatcccgagacgcctccctcgattttcattctctcgttaaaagcggggggggtg
ggaatcaccctaaccaaagccaatcatgtgtttcactttgaccgctggtggaaccccgcc
gtagaaaaccaagctaccgaccgcgcctttcggattggtcaagagaaaaatgtctttgtc
cataaatttgtgaccctcggctcattagaggaacgcatcgaccaaatgattgaggataaa
cagaagttagccgaatccgttgtgggggcggatgagtcctggctcacggaattagacaac
gacaccttcaaagacctaattgccctgaatcgaaatgccgtgttgtag
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