Phormidium yuhuli: NEA10_01465
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Entry
NEA10_01465 CDS
T08410
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pyh
Phormidium yuhuli
Pathway
pyh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NEA10_01465 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_01465 (uvrA)
DNA repair and recombination proteins [BR:
pyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NEA10_01465 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NEA10_01465 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
AAA_23
nSTAND1
AAA_22
AAA_21
nSTAND3
AAA_33
NACHT
AAA_25
AAA_18
AAA_28
Septin
Viral_helicase1
AAA_14
DnaJ_CXXCXGXG
AAA_24
MeaB
cobW
Motif
Other DBs
NCBI-ProteinID:
USR91436
LinkDB
All DBs
Position
370725..373625
Genome browser
AA seq
966 aa
AA seq
DB search
MARRVTSSQSPSTSSPKGLSPKLEDVIRIRGARQHNLKQIDIDLPRNQLIVFTGVSGSGK
SSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVESIEGLSPAISIDQKSTSHNPRST
VGTVTEIYDYLRLLFGRAGEPHCPHCDRSISPQTIDVMCDRILELPERSKFQILAPVIRG
KKGTHKKLLSSLTSQGFVRVRIDGEVRDLSDHIELDKNQIHDIEIVVDRLICKPGLQERL
TDSLATALKQADGVVMISAQLPDEKRPQEILFSENFACPEHGAVMEELSPRLFSFNSPYG
ACPACHGLGSSRSFAPERVIPDPSAPVYSAIAPWSDKDNSYYLSVLFSVGQAFDFEINTP
WNQLSAEQQQILLYGSPDPIWIETDSRYSDNRGYYRHFAGVLAMLQRQYDDTSSEQIRDK
LEQYLVDQVCEVCGGKRLKPEALAVRIGQYNITDLTGVAIDECLNRLNHLELSPRQAQIA
ELALREIRDRLQFLLDVGLDYLTLDRSATSLSGGEAQRIRLATQIGSGLTGVLYVLDEPS
IGLHQRDNSRLLKTLTKLRDLGNTLIVVEHDEDTIRSADHLVDIGPGAGVHGGEIVAQGN
LTTLLNAKDSMTGAYLSGRRQIDPPEERRPGNGRVLQLQDAHRNNLKHIDVEIPLGKLVC
ITGVSGSGKSTLVNDLFHPALQHHLTRKVPMPQGLKSLSVKGSKKKDIKDIVDKVIVIDQ
SPIGRTPRSNPATYTGIFDSIRQVFAETIEAKARGYKPGRFSFNVKGGRCEACGGQGVNV
ISMNFLPDVYVQCDVCKGARYNRETLQVTYKGHSIADVLNMTVEEALGVFENIPRAASRL
QTLLDVGLGYIHLGQPAPTLSGGEAQRVKLASELSRRATGKTLYLIDEPTTGLSFYDVHQ
LLNVMQRLVDKGNSILVIEHNLDVIRSADWLIDLGPEGGDKGGQVIAVGTPEMVAQVPES
HTGTYL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcgcgtcacatccagccaatccccttcaacctcctcccccaagggactctcc
cccaaactcgaagatgtcattcgcattcggggggcgcgtcaacataacctgaaacagatt
gatatcgacctcccccgcaatcaactcatcgtctttacaggcgtctccggttccgggaag
tcctccctcgccttcgataccatcttcgccgaaggtcaacggcgctatgtcgaatccctc
agcgcctatgcgcgtcagttcctgggacaactggacaaacccgatgtagagtccatcgaa
ggtctcagtcccgccatctccatcgaccagaaatccacctcccacaacccccggtctacc
gtcggaaccgtcactgaaatttacgactacctgcggctcctctttggccgtgctggagaa
ccccactgtccccattgcgatcgctccatcagcccccagaccatcgatgtcatgtgcgat
cgcatcctggaactccccgaacgcagtaaatttcaaatcctcgctcccgtcatccgaggg
aaaaaaggaacccacaaaaaactcctctccagcctcacctcccaaggcttcgtccgagtt
cgcattgacggcgaagttcgcgatctctcagaccatatcgaactggacaaaaaccaaatc
cacgacatcgagattgtcgtcgaccgcctcatctgcaaaccgggactgcaagaacgtctc
accgactccctggccaccgccttaaaacaagccgacggcgtggtcatgatttctgcccaa
ctccccgacgaaaagcgtccccaagaaatcctcttttccgaaaacttcgcctgtcccgaa
catggcgcggtgatggaagaactctcgccacggctgttttccttcaactccccctatggc
gcctgtcccgcctgtcatggcttagggagttcccgcagcttcgccccagaacgagtcatt
cccgatcccagcgcccccgtttacagtgcgatcgccccttggtctgacaaagacaacagt
tactacctctcggtcctctttagcgtcggccaagccttcgacttcgagattaacaccccc
tggaaccaactcagcgccgagcaacaacagatcctcctctacgggtcccccgaccccatc
tggattgaaactgattcgcgctactccgacaatcgtggctactaccgccactttgccgga
gtcctggccatgttgcaacgccagtatgacgacacctcctcggaacaaatccgagacaaa
ctcgaacaatacctcgtggaccaagtctgcgaagtctgtggcggaaaacgcctcaaaccc
gaagccctcgccgttcgcatcggtcaatataacatcacagacctgaccggagtggcgatc
gacgaatgcttaaaccgcttaaatcacctagaactcagcccccgccaagcccaaatcgct
gaactggccctgcgggaaattcgcgatcgcctgcaattcctcctggacgtgggcctcgac
tatctcaccctcgatcgctccgccaccagtctctccgggggagaagcccaacgcatccgc
ctggccacccaaatcgggtccggcctcacgggagtcctctatgtcctcgatgaacccagc
atcggactccaccaacgggacaacagccgtttactcaaaaccctaaccaagctccgggat
ttaggcaataccttaattgtcgtcgaacatgacgaagataccatccgcagcgccgaccac
ctcgtggatatcggtcccggcgccggcgttcatggcggggaaattgtcgcccagggaaat
ttaaccacccttctcaacgccaaagactccatgacgggggcctatttatcaggacgacgc
cagattgacccccccgaagaacgccgccccggaaatggtcgagttctccaactccaagat
gctcatcgcaataatctcaagcatattgatgtggagattcccctcgggaaactggtttgt
atcaccggggtctcggggtccggaaaatccaccctagtcaatgacctattccaccccgcc
cttcaacatcatttgacccggaaagttcccatgccccaagggttaaaaagcctcagtgtt
aagggaagtaaaaagaaagatatcaaagatattgttgacaaagttattgtcattgaccaa
tcccccattggtcgaactcctcgctctaatcctgcgacttacaccggaatttttgatagt
atccgtcaagtttttgctgaaaccatcgaagccaaagcccgaggctataaaccgggtcgt
ttctcctttaacgtcaaaggaggacgctgcgaagcctgtggcggccaaggggtcaacgtc
atttccatgaattttctgcccgatgtttatgtgcaatgtgatgtttgtaaaggggcacga
tacaatcgggaaaccttacaagtcacctataaaggtcattctattgccgatgttttaaat
atgaccgttgaagaagcgttaggagtctttgaaaacatccctcgcgccgccagtcgccta
caaactctcctggatgtggggttagggtatatccatctgggacagccggctcccacccta
tctggaggggaagcccaacgggtcaaactcgcctcagaactctcccgccgcgccaccgga
aaaaccctctatctcatcgatgaacccaccactggtttatcgttttatgatgttcatcaa
ctgttaaacgtcatgcagcgtttagttgataagggcaactcgattctcgtgattgagcat
aacttagatgtcatccgctcagccgattggctcattgatttaggtcctgaagggggcgac
aaaggggggcaagtgattgccgtgggaaccccggagatggtcgctcaagtgccagaatct
cataccggaacctatttatag
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