Phormidium yuhuli: NEA10_03040
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Entry
NEA10_03040 CDS
T08410
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh00061
Fatty acid biosynthesis
pyh00071
Fatty acid degradation
pyh01100
Metabolic pathways
pyh01212
Fatty acid metabolism
pyh02024
Quorum sensing
pyh04146
Peroxisome
Module
pyh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NEA10_03040
00071 Fatty acid degradation
NEA10_03040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NEA10_03040
09145 Cellular community - prokaryotes
02024 Quorum sensing
NEA10_03040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pyh01004
]
NEA10_03040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyh04147
]
NEA10_03040
Enzymes [BR:
pyh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NEA10_03040
Lipid biosynthesis proteins [BR:
pyh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NEA10_03040
Exosome [BR:
pyh04147
]
Exosomal proteins
Exosomal proteins of breast milk
NEA10_03040
Exosomal proteins of breast cancer cells
NEA10_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
ROF
Motif
Other DBs
NCBI-ProteinID:
USR91719
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All DBs
Position
745224..747188
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AA seq
654 aa
AA seq
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MTSISTQLPPQEQLNLKNSLDYSQVNSLTEVWSIASDRFQNLTALENPHDDPPVKLSYRD
LWQQIQTFATALQSLGLDSGDELPPRVVLFSENSPRWFIADQGIIAAGAADAVRSSQADR
DELLYIAQHSQSRGLVLENLATLEKLQSSNDEELRLSQDIAWVVLLSEETPPEETPFRLL
NFSQFMALGDAARFKLPQSDRSTLATLIYTSGTTGRPKGAMLTHGNLLHQVNAFRHVFVP
QAGDRALSILPSWHVYERTCEYFLLSQGCAQIYTSLRYFKTDLKDHQPQIMIGVPRLWES
IYEGVQKNFREQPANKQKLVSFFINVSRRHLQAQNIRDGLILDQTPPSGLERFMARLQAL
ALTPLHGLGHKLVYSKVRAATGGKIKFLISGGGSLAQHIDEFFGIIGIKLLVGYGLTETA
PVLTVRRAWANLQGSAGLPLVETEIRIVDPETGRSLPQGERGLVLGRGSQVMRGYFNNPE
ATQNAIDAEGWFNTGDLGCLLPGGHLRLTGRAKDTIVLSNGENIEPQPIEDACVRSAYID
QIVLVGQDQRQLGALIVPSWESLAQWGTAQGLTVNSEAIPPLDLHQEQVQQLFREELSRE
VKNRPGYRADDRIGPFRLVQEPFSMENGMMTQTLKIKRPVVQERYRDTINEMFG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacctctatatccactcaactgcctccccaggagcagctaaacctcaaaaattcccta
gattacagccaagttaactctctgaccgaggtctggtctattgccagcgatcgcttccaa
aacctgactgccttagagaatccccatgatgaccccccggtcaaactctcctatcgggac
ctctggcaacagattcagaccttcgccacggccctacagagtctgggcctcgactcaggg
gatgagttaccgccgcgagtggtgctattttctgaaaacagtccccgctggttcattgcc
gatcagggaattattgccgccggggccgccgatgcggtgcgatcgagtcaagccgatcgc
gatgaacttctctacattgcccaacatagtcaaagtcggggcctggtcttggaaaaccta
gcgaccctggaaaaactccaatcctctaacgatgaggaattacggctaagtcaggatatt
gcctgggtggtgttactctcagaagaaactccccccgaggaaactcccttccgcctgctc
aacttcagtcaatttatggcgttgggggatgcggcccgcttcaaactaccccagagcgat
cgcagtaccctggccaccctcatctacacctccggaaccacgggccgtcctaaaggagcc
atgttgacccatggcaacctcttgcatcaggttaacgccttccgtcatgttttcgtgccc
caagcgggcgatcgcgccctcagcatcctccccagttggcacgtgtacgagcgcacctgt
gagtatttcctgctctcccaaggctgcgcccaaatctacaccagcctgcgctacttcaaa
accgatctcaaagaccatcaacctcaaatcatgattggcgttccccgtctctgggaatct
atctacgagggggtgcaaaagaacttccgagaacaaccggctaacaaacagaaactggtc
agcttcttcatcaatgttagtcgtcgccatctccaggcacaaaacatccgcgatggtctc
atccttgatcagacccctccctcggggttagaacggttcatggcccgcttacaagcccta
gccttgacccctctccatggcttaggtcataaactggtctatagtaaagtccgtgcggct
acagggggaaaaatcaagtttctcatcagtgggggtggctctttggctcaacatattgat
gagttcttcggcatcatcggaattaaactactcgtgggctacggactgacggaaaccgcc
cccgtcttaacagtacgtcgtgcttgggccaatttacaggggtcggcgggactacctctg
gtagaaacggaaatccgcattgttgatcctgaaactgggcgttcactgccgcaaggagaa
cgaggcttagtcttgggacgcggttctcaggtcatgcgcggctatttcaacaaccccgag
gcgacacagaacgcgattgatgccgaaggctggtttaataccggggatttaggttgttta
ctccccggtggacacctgcgtctaacgggacgagcgaaagacaccattgtcctcagtaat
ggggagaacatcgagcctcaacccattgaggatgcctgtgttcggagtgcttatatcgac
caaattgttttggtgggtcaggatcagcgtcaactgggggcgttgattgtcccgagttgg
gagtcgttagctcaatggggaacggctcaaggacttacggtgaatagcgaggcgattccg
cccttagacctccatcaggagcaggtacagcaactgttccgggaagaacttagccgggag
gtgaagaatcgtccaggctatcgggccgatgaccggattggccccttccggttggtacag
gagccgttctcgatggaaaatggcatgatgactcagactctaaaaatcaaacggccggtt
gtgcaggagcgctaccgcgataccattaacgagatgttcgggtag
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