Phormidium yuhuli: NEA10_03420
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Entry
NEA10_03420 CDS
T08410
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyh03016
]
NEA10_03420
Enzymes [BR:
pyh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NEA10_03420
Transfer RNA biogenesis [BR:
pyh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NEA10_03420
Prokaryotic type
NEA10_03420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
USR91791
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Position
complement(826888..827865)
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AA seq
325 aa
AA seq
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MEIVFLGTSSGVPTRSRNVSSLAVRLKQRGEIWLFDCGEGTQHQLLQSDLKVGRIRRIFI
THMHGDHVFGLMGLLASIGLAGAPDRIDLYGPPQLETYLDACARYSHTHLHYPITVHKHK
PGVIYEDEDYRVLCDRLDHRIPAYGYRVEERDRPGRFDVAKAQALGIPPGPVYGQLKLGQ
QVTLDDGRVIHGQDLCGDPQPGRKVVYCTDTIYCDNAVRLSEGADVLIHEATFSHRDATL
AQQRLHSTSTMAAQVALAAGVKHLFMTHFSPRYAPGNDLDLRDLLSEARAIFPHTDLAYD
FLTYEVPKPSNAMAVSSSNEGSRSR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatcgtttttttaggaaccagttcaggtgtccctacgcgatcgcgaaatgtgtca
agtctggccgtgcgcctgaaacaacgaggtgagatttggttatttgactgtggagaaggg
acacaacatcaactccttcagagtgatctgaaggtggggcgaattcgccgtatttttatt
acccacatgcatggggatcatgtgtttggcttgatgggactcctggcaagcatcggttta
gcgggagcgcccgatcgcattgatttgtatggtcccccacaactcgaaacctatctcgat
gcttgtgcgcgctattcccacacccatttgcattatccgattacggtgcataagcataag
cctggggtcatttatgaggatgaggactatcgggtgctgtgcgatcgcctcgatcaccgg
attccagcctatggctaccgggtggaggagcgcgatcgcccgggacgttttgacgtggcg
aaagcccaggccctgggcattcccccgggtcccgtttatggtcaactcaaactaggacaa
caggtgacgttggacgatggacgggtgattcatggtcaggatctatgtggggatccccaa
ccgggacggaaagtggtctattgcacggataccatttattgtgacaatgcggtgcgattg
tctgagggagccgatgtactgattcatgaggcgaccttctcgcaccgagatgccacgttg
gctcaacagcggttacattcaacgtcaacgatggctgcacaggtcgccctcgcggctggg
gtcaaacacctgtttatgacgcactttagtccccgatatgccccgggaaatgatctggat
ttgagggatttgttaagtgaggcgcgggccatcttcccacacactgacctagcctatgac
tttttgacctatgaagtccccaagccatcaaatgctatggcggtttctagctcaaacgag
ggctctaggagccgttag
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