Phormidium yuhuli: NEA10_03600
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Entry
NEA10_03600 CDS
T08410
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NEA10_03600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
S1
HHH_9
YqgF
S1_RRP5
HHH_7
T2SSK
Spt6_S1
HHH_6
CsrA
Motif
Other DBs
NCBI-ProteinID:
USR91824
LinkDB
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Position
complement(862924..865092)
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AA seq
722 aa
AA seq
DB search
MAATLNQQLAQTLSGEFSLTLHHVSNALELWLDGATIPFIARYRKERTGEMTEVVLRELF
ERYGYLSELEERKTAILESIAAQGKLTEDLEKKIRACQQKTDLEDLYLPYRPKRRTRATI
ARERGLEPLAEAIAAHNHPQAPRFDLDGESAKFVNPEQEVETAAAALQGAADILAEAIAE
DAEIRAALRQTLLEQGSFESRIKKDYPEGSTKYETYRNYQISSRKIAPHNLLALLRGERE
GILDLKLTHDEERFLQQLSNRLIQTGDRRLREFYQDVIQDAYKRLLQPSISNRVIGEKRD
WADEASIETFEANLRALLLAAPAGRKATLGIDPGFRTGCKVAVISDLGKFLTYETIFPHQ
SAKRRQEAAQTLQNLVNTYGIELIAIGNGTASRETERFVKEVLPELANPPIALLVNESGA
SVYSASEVAIAEFPELDVTIRGAISIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTLLK
RKLAETVESCVNYVGVDLNTASAALLTSVSGLSKTVANNIVAYRDEQGAFRNRRQLLKVP
KLGPKAFELSAGFLRVRDGDNPLDNTAVHPERYGVVGAIAQDLGASLAQPEEIAQGMRSR
DLKRYVTDEVGEPTLRDILGELEKPGRDPRDEFTYASFKEGVETLADLQEGMVLEGVVTN
VANFGAFVDVGVHQDGLVHISQLANRFVRDPNEVVKVGDVVKVKVLSVDERLKRIGLSMK
EV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgttgaatcaacaactggctcaaactctatctggggagttttctttaacg
ctccatcatgtctcgaatgcgttagaactctggcttgatggggcgacgattccctttatt
gcccgctatcgcaaggaacgcaccggcgagatgacggaggtggtgttacgggagttgttt
gagcgttatggctatttgagtgagttggaggagcgcaaaacggcgattttagagtcaatt
gcggctcaggggaaattgacagaggacttagagaagaagattcgggcctgtcagcagaaa
acggatttggaagatctctatctcccctatcgccccaaacgccgcactcgggcgacgatt
gcccgggaacgggggttggaacctctggcggaggcgatcgccgctcataatcatccccag
gcccctcgctttgatttagatggggaaagtgccaaatttgtcaaccccgagcaggaggtg
gagacggcggcggcggcgttacagggagcggcggatattttggcggaggcgatcgccgag
gatgcggagattcgggcggcgttgcgtcaaacgctgttggaacaggggagttttgagtct
cggattaagaaagactacccggaaggtagcacgaagtacgaaacctatcgcaattatcag
atttccagccgtaaaattgccccgcataatcttttggccctgttacgtggggaacgagag
gggattttggatctcaagctaacccatgatgaggagcggtttttgcagcagttgtcgaac
cgcctgattcagacgggcgatcgccgtttgcgtgagttttatcaagatgtgattcaagat
gcctataaacgcctattgcagccttcgattagcaatcgggtgattggggaaaaacgagat
tgggctgatgaggcctcgattgagacgtttgaggctaatttacgggctttgctcttagcc
gctccggcgggccgcaaggccactctggggattgatcccggcttccgcacgggctgtaaa
gtggcggttattagcgacttgggtaagtttttgacctatgaaaccatttttccccatcag
tcggctaaacgccgtcaagaagcggcgcaaacgctacaaaatttggtcaatacctatggc
attgaattgattgccattggcaatggaaccgccagccgtgagacggaacggtttgttaag
gaggtgttgccagagttggcgaatccacccatcgccctattggtgaatgagtcgggggcg
tcggtgtattccgcgagtgaggtggcgatcgcggaatttccggaattggatgtgacgatt
cgtggggccatcagtattgcccgacgtttacaagatcctctggcggagttggtgaaaatt
gacccgaaatcgattggggtggggcaatatcagcatgatgtgaatcagacgctcctgaag
cgcaaactggcggagacggtggagagttgtgtgaactatgtgggggtggatctgaatacg
gcctcggcggccttgttaacctcggtgtcggggttatcgaagacggtggctaataatatc
gtcgcctatcgcgatgaacagggggccttccgcaatcgccgtcagttgttgaaggttcct
aagttggggcccaaggcttttgagttatcggcagggtttttgcgggtgcgtgatggggat
aatcctttggataatacggcggttcacccagaacgctatggggttgtgggggcgatcgct
caagatttgggggcatctttggcccagccggaggagattgctcaggggatgcgatcgcgg
gatttaaagcgttatgtgacggatgaggtgggggaaccgacgttacgggatattttaggg
gagttggagaagccgggacgagatcctcgggatgagtttacgtatgccagtttcaaggag
ggggtggaaaccttggcggacttacaggaggggatggtgttggaaggggttgtgacgaat
gtggctaattttggggcgtttgtggatgtgggggtacatcaggatggcttggtgcatatt
tctcagttggcgaatcgctttgtgcgcgatcccaatgaggtggtgaaggtgggagatgtg
gtgaaggtgaaggtgttgtcggtggatgaacggttgaagcggattggtttgtcgatgaag
gaggtttag
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