Phormidium yuhuli: NEA10_04840
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Entry
NEA10_04840 CDS
T08410
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pyh03009
]
NEA10_04840
Enzymes [BR:
pyh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
NEA10_04840
Ribosome biogenesis [BR:
pyh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NEA10_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
USR92053
LinkDB
All DBs
Position
1128321..1129124
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AA seq
267 aa
AA seq
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MEERLQKLLSHWGIASRRRAEELIRQGRVSLNGSTAELGAKAHPGRDRILVDGRIVNPEE
EPQRLYILLNKPAGVVSTCRDTHGRPTVLNLLPPQMVQGQGLHPVGRLDVDSTGALLLTN
DGDLTYALTHPRYHVPKTYQVWVQGSPSEATLQQWRDGVILDQRKTLPARVKVIRRDGHR
QTQLEVVLTEGRNRQIRRIADQLGYPVTGLHRAKIASVELNNSPETVLPPGCHRCLTESE
INALQLWQTQLTLKSVGVRSKLKEHSG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaacgactacaaaaacttttatcgcattggggcatcgcctcccgacgccgtgcc
gaggagttaattcgtcaaggacgagtcagtctcaacggttcaacggctgaattgggggcg
aaagctcatcctggacgcgatcgcatcctcgttgatggtcgcatcgttaatccggaagaa
gagccgcaacgactgtatatcctcctcaacaagccggccggtgtggtcagtacctgtcgc
gatactcatgggcggcccacagtcctaaatcttctaccgccccaaatggtgcaaggacag
ggacttcaccccgttggccgtcttgacgttgactccaccggagccttattgctgacaaat
gatggggacctcacttatgctttaactcatccccgctatcatgtacccaagacctatcag
gtttgggttcaaggttctccctcagaggcaacattgcagcaatggcgagatggggtcatc
ctagatcagcgcaaaaccctacccgctcgggtaaaagtcatccgtcgggatggccacaga
caaactcaactcgaagtggtgttaaccgaagggcgcaaccgccaaattcgtcgtattgcc
gaccaacttgggtatcccgtcacgggactccaccgggcaaaaattgcctcagttgaactt
aacaactcccccgagacggttttgcccccagggtgccatcgctgtttgaccgaatcagaa
attaacgctttacagttatggcaaacgcaactcaccctaaaatcagtaggcgtgcgatcg
aagctcaaggagcacagcggatga
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