Phormidium yuhuli: NEA10_05940
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Entry
NEA10_05940 CDS
T08410
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pyh
Phormidium yuhuli
Pathway
pyh02010
ABC transporters
pyh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NEA10_05940
03070 Bacterial secretion system
NEA10_05940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pyh02000
]
NEA10_05940
02044 Secretion system [BR:
pyh02044
]
NEA10_05940
Transporters [BR:
pyh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NEA10_05940
Secretion system [BR:
pyh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NEA10_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39
AAA_21
AAA_22
ABC_ATPase
AAA_29
AAA_16
AAA_30
Zeta_toxin
nSTAND3
DUF87
AAA_23
RsgA_GTPase
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
USR92261
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All DBs
Position
1366685..1369741
Genome browser
AA seq
1018 aa
AA seq
DB search
MTQTTSQPQISDFLAQTAPFDRLKPESRRQLAAKAQLLRYRIGQPLLVREKMPAQISLIY
QGQVRVLGYDSRNGHSTSLRLVGPGEVLGWISVVRDRPCETALASSETICVSINVNDFRD
CLRQEQEFNRAVREHPSLTEVFELSSAELQRRADATADLKTLCYDLWSEAQIVDIPKGGS
FEPSRLDPKLLWWVSRGELPDSHVGDRVYPARHQTTRLDNSLRLVGVPWGEKVAQAVSSP
QLPQAGEPDPDGQPRDHGPDGSEESGNGNGRAIVSNGSSALASVPEAPPRPPDPPRDPLA
PPPRYPHIRGSGPIGSPLACFHMLCKYMRINFRKDAIRKLLEQQLKSKGAVSLYGCGTIM
PTLGVQAQLARIPKNSLGRLQAPGMMKWQDSYAVIYSINEKEIILAVPEIGILHRTPAQV
AEMVEGDVAEVVLVQPPSGDQSEKFSMWWFLPSLLRYKKVLIEVFIASFFVQLFGLANPL
LTQVIIDKVLGQRSIETLNILGVFMIGVALFEALLTSLRTYLFVDTTNRIDLNLGSEVID
HLFRLPLGYFDKRRVGDIAGRVNELANIRQFVTGTALTVVLDAVFSVIYIAVMVTYSWLL
TAVSLVTVPFFTALIVFVSPIVRRLLLKRAERYADAQSYLVETLNGMQTVKAQNIELTSR
WNWYERYARYMNAGFRTILTNTAASSVASFLNKLSSLLLLWVGAYLVINQELTLGQLIAF
RIISGNVTGSLLRFVQVWQSFQEVGMSIERLRDILNSEPESNDSDRLNIPLPNIEGHVKF
EDVCFRFVPTSPLNVANVNIEFPVGSFVGIVGQSGSGKSTLMKLLQRLYPPETGRIHIDG
YDINKVELYSLRRQVGVVLQDTLLFNNTIKANIALNNPEASDEEIINAAKVAVAHDFIMT
LPQGYNTIVGERGSALSGGQRQRIAIARTVLQKPRLLILDEATSALDYNLESLVCQNLVE
EFRGRTVFFITHRLPTVQGADCILMMDNAALVEQGTHEELMALKGRYYCLYEQQQSQL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgactcagactacctcccaaccccaaatttcggattttctggcccaaacagcccccttt
gaccgcctcaagcccgaaagccggcggcaactagcagctaaggctcagctattgcgctat
cgcatcggtcaacccctgctcgtacgggaaaaaatgcccgcgcaaatttccctgatttat
cagggccaagtgcgggttctcggctacgacagccgtaatggtcattccaccagtttacgc
ctggtcggtcctggggaagtcctgggctggattagtgtcgtgcgggatcgtccctgtgaa
acggccttagcatcgagtgaaaccatttgcgtcagcatcaatgtcaacgactttcgggac
tgtttgcggcaagaacaagagtttaaccgtgctgttcgggagcatccgagcctaacggaa
gtctttgaactgagcagcgcagaactgcaacgacgagccgatgctacggcggatctcaaa
accctctgttacgacctctggtcagaggcccaaatcgtcgacattcccaaagggggaagc
ttcgagccaagccggttagatccgaagctgctctggtgggtcagtcgtggagaattgccc
gattcccatgtgggcgatcgcgtctatccggcccgccaccaaaccacgcgcctggacaac
tccctacgcctcgtgggagtgccctggggtgagaaagtggctcaagcggtgtcctctccc
caacttccccaggccggtgaacccgatccagatggccaacccagagaccatggccccgat
ggctccgaagagtctggtaacggcaatggcagagcgatcgtttccaatgggagtagcgcc
ctagctagcgttccagaagcccccccacgaccccccgatccgcctcgagaccccctagcc
cccccaccccgctatccccatattcgtggtagcggccccatcggctcgcccctagcctgc
ttccacatgctctgcaaatatatgcggattaacttccggaaggatgccatccgtaaattg
ctggagcagcagttaaaaagtaaaggggctgtatccctttatggctgtggtacgattatg
cccaccctaggggtgcaagctcaactggctcgtatcccgaaaaattccctgggacggctg
caagcgccggggatgatgaaatggcaggatagctacgccgttatctatagtattaacgaa
aaagaaattatcctagcggttcccgaaatagggattctccatcgtaccccagcccaagtg
gcagaaatggtcgagggggatgtggccgaggtggtgctggttcaacctccctccggcgat
cagtctgagaagttcagcatgtggtggttccttccctccctgctgcgctataaaaaagtc
ctgattgaggtgtttattgcctccttcttcgttcagttgttcggactggcaaaccccctc
ttaacccaggtcattattgataaggtcttgggtcagcgtagtattgaaaccctgaatatc
ttaggggtgttcatgatcggggtcgcgctgtttgaagccctgctgaccagtttgcgaacc
tatctgttcgtggataccaccaaccgtattgacctcaacctcggctctgaggtgattgac
cacctcttccgactgcccctggggtacttcgataaacgccgggtgggagatatcgctgga
cgggtcaatgagttagccaacattcgtcagttcgtcaccggaaccgccctgaccgtagtt
ttggatgcggtgttctcggtgatttatattgccgtaatggtgacctacagttggctgctg
acggctgtgtccctcgttacagttcccttctttacggcgttgattgtcttcgtctccccg
attgtgcggcgactgctgctgaaacgggcggaacgctacgccgacgctcaatcctatctg
gtggaaaccctaaatgggatgcagacggtgaaggcgcaaaatattgagttgacctcccgc
tggaactggtacgaacgctacgcccgttacatgaacgccggtttccggacaatcctcacc
aataccgctgccagttccgtcgccagtttcctaaataaactgtcctccctgttgctgttg
tgggtgggggcttatttggtcattaaccaagagctaaccctgggtcagctgatcgccttc
cggattatctccgggaacgtgaccggctcgctgctgcgctttgtccaggtttggcagagc
ttccaggaagtggggatgtccatcgaacgtctgcgggatattctcaactccgagccggag
agtaacgacagcgatcgccttaacattcccctgccaaatatcgaaggacacgttaaattt
gaagatgtctgcttccgcttcgtacccacaagtccgctgaacgttgccaatgtcaacatt
gagtttccggtcgggtcgtttgtggggattgtcggacagagtgggtccggtaagagtacc
ctgatgaagctgctacaacggctttatcccccggaaacgggacggattcatatcgacggc
tatgacatcaataaggtcgaactctattcgctacggcgtcaggtgggggtggtactacaa
gataccctcctgttcaacaacaccattaaggccaacattgccctgaataaccccgaggcc
agtgatgaggaaattatcaacgctgctaaagtggcggtggcccatgacttcatcatgacc
ctgccccaaggctacaacaccattgttggagaacgggggtccgccctatctgggggacag
cgacaacggattgcgatcgcccggacggttctgcaaaaaccccgcctgttgattctcgat
gaagccaccagtgccctggactacaacctcgaaagcctggtttgtcaaaatctcgtcgaa
gagttccgaggacgcacagtgttctttattacccaccgcttacccaccgtacaaggagcc
gattgtattctgatgatggacaacgccgctctggtggagcagggaacccatgaggaatta
atggcacttaaagggcgctactactgtctatatgaacaacaacagtctcagttgtaa
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