Phormidium yuhuli: NEA10_07495
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Entry
NEA10_07495 CDS
T08410
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyh03016
]
NEA10_07495 (truB)
Enzymes [BR:
pyh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NEA10_07495 (truB)
Transfer RNA biogenesis [BR:
pyh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEA10_07495 (truB)
Prokaryotic type
NEA10_07495 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
USR92552
LinkDB
All DBs
Position
complement(1731520..1732440)
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AA seq
306 aa
AA seq
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MLGFLNLNKPLGWTSHDCVAKVRGLLKTKKVGHGGTLDPKASGVLPLAVGRATRLLQYLP
DGKAYEATVRFGLSTTTDDLDGEVITQQAVPQLSLAQIEAVLPQFLGRIEQIPPQYSAIH
VGGKRLYDLARAGVMVEVPSREVEVMGIEVLGWQPGEFPEVRLGIRCGGGTYIRAIARDL
GAVLGTGATLAQLERTESSGFYLADGIGLEDLIARVERQEEVAGLLYSPEVAIAHLPHVR
LPQHLAQRWCLGQRFELEPEQSALDADALAVFREDGQFLGIGTWKVTKSKMDTTPKFAPK
LVFFHP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcttggttttttaaatctcaacaaacccctcggctggacatctcatgattgtgttgct
aaggttcgggggctcctgaaaacaaaaaaagtgggtcatggaggaactcttgatcccaaa
gccagcggcgtgttacctctagctgttggacgagccacgcgcctgttgcaatatctccca
gatggtaaggcctacgaagccacggtacgttttggcctgtcgaccaccacggatgacttg
gacggagaggtcattactcaacaggcagttccccaattatctctagctcagattgaagcg
gtgctcccccaatttttaggtcgaattgaacaaattccgcctcaatatagtgccattcat
gtgggcggaaaacgactatatgatttagcacgagctggggtgatggttgaggttccgtcg
cgagaggtggaggtgatgggaattgaggtgttgggttggcagccgggagagttccccgag
gttcgcctggggattcgctgtggtgggggaacctatattcgggcgatcgcccgtgatttg
ggggcagttcttgggactggggcgacgttagctcagctggaacgcaccgagagtagtggg
ttctatttggcggatggtattggtttagaagacttaatcgcgcgggtggaacgtcaggag
gaggtggcggggctattatattcccctgaggtggcgatcgcccatttacctcacgttagg
ctaccgcagcatctggcacagcgatggtgtctgggacaacggtttgagttagaaccggaa
cagtcggctttggacgcggatgccttggcggtgtttcgagaggatggccaatttttagga
attggaacctggaaagttacgaaatcaaagatggatacaacgccaaagtttgccccaaag
ttggtctttttccatccctaa
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