Phormidium yuhuli: NEA10_08760
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Entry
NEA10_08760 CDS
T08410
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_08760 (sbcD)
DNA repair and recombination proteins [BR:
pyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NEA10_08760 (sbcD)
Archaeal homologous recombinant proteins
NEA10_08760 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
USR92785
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All DBs
Position
complement(2026273..2027511)
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AA seq
412 aa
AA seq
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MVKVLHLSDIHLGSGFSHGKVDPETGLNTRFLDFIGTLRRCIDRALDEPVDLVLFGGDAF
PDATPPPYIAEAFAVEFHRLAEANIPTVLLVGNHDRYSLADGSASLGIYRTLAVPNFIVG
DRLDLHSIPTRHGPIQVITLPWLTSSTLLTRPESQGLSIAEINQLLAERLRIALEGEIRK
RDRNCPTILLGHLMSDKAKFGAERLLAVSKGFTIPLSLLVRQEFDYVALGHVHKHQNLNP
SNDPPVVYPGSIERVDFSEEKEDKGYVLAEVEVGSCHWEFCPLPVRPFLTVSVDVSQAED
PQEMLLKTLGKKDLGDRVVRLRYKLRADQLDRINTSELRKALKPAHSATIQPELISQLSR
PRIPSLSGRAIDPLDALHAYLDNREDLRDIREDLVKAAEHLLHEDELPLFRD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttctacatctgtctgatattcaccttgggagtggtttctctcacggcaaa
gttgaccccgagaccggtctcaatacaaggtttctagactttatcggcactctcagacgc
tgtatcgatcgcgccctcgatgaacccgttgacttggttctatttgggggggatgccttt
cccgacgccacccccccgccctatatcgcagaagccttcgccgtagaatttcaccggctg
gctgaggcgaacatccccacggtactgctcgtgggcaatcacgatcgctattccctagct
gatggaagtgccagtttaggaatttaccgcaccctagccgttcccaacttcattgtcggc
gatcgcctagacctccattccatccccacccgccatggcccaatccaagtcatcaccctc
ccctggctcaccagttccaccctcttaacccgtcccgaaagccaaggcctctccattgcc
gaaatcaaccaactcctggccgaacgcctacgcattgccctagaaggagaaatccgcaaa
cgcgatcgcaactgtcccaccattcttctgggtcatctcatgagtgataaagccaaattc
ggggcggaacgactcttagcggtgagtaaaggcttcaccattcccctctccctattggtg
cgtcaggagtttgactatgtcgccttgggccatgtccacaaacatcaaaatctcaacccc
agtaatgacccccctgtggtctatccgggaagtattgaacgggttgacttcagtgaggag
aaggaagacaaaggctatgttttagcggaggttgaggtcggatcttgtcactgggagttc
tgtcccctcccggttcgtccattcctgacggtttccgttgatgtttcccaagccgaagac
ccgcaagagatgttactgaagaccctcggcaaaaaagacttgggcgatcgcgttgtccga
ctccgctacaaactccgggccgaccaactcgatcgcatcaatacctcagaacttcgcaag
gccctcaaacccgcccacagtgccacaatccaacccgagttaatcagccaactgagccgc
cctcgtattccctccctcagtggacgggccattgaccctctcgatgcccttcatgcctat
ctagataaccgggaggacttgcgagatatccgcgaggatctcgttaaagcggcggaacat
ctcttacatgaggatgagttgcccctattccgggattag
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