Phormidium yuhuli: NEA10_13400
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Entry
NEA10_13400 CDS
T08410
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyh03016
]
NEA10_13400 (miaB)
Enzymes [BR:
pyh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NEA10_13400 (miaB)
Transfer RNA biogenesis [BR:
pyh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NEA10_13400 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
USR89852
LinkDB
All DBs
Position
complement(3132729..3134078)
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AA seq
449 aa
AA seq
DB search
MTVSPRRYHITTFGCQMNKADSERMAGILEALNFEATEDPNLADLVLYNTCTIRDNAEQK
VYSYLGRQAKRKQNDPNLILAVAGCVAQQEGESLLRRVPELDLVMGPQHANRLGDLLEQV
FSGSQVVATEPVHIMEDITKPRRDSAVSAWVNVIYGCNERCTYCVVPNVRGVEQSRTPEA
IRAEMEELGRQGYKEVTLLGQNIDAYGRDLPGSTPEGRHLHTLTDLLYFVHDVPGIERIR
FATSHPRYFTERLIRACQELPKVCEHFHIPFQSGDNEILKAMARGYTHEKYRRIIDKIRH
YMPDAAISADAIVGFPGETEEQFQNTLKLTADIGFDILNTAAYSPRPGTPAADWENQLSD
EVKQDRLQRLNHLVSLKAAERSQRYANRVEEVLVEEQNPKDPTQVMGRTRGNRLTFFEGN
LQELKGKTVSVEISEVRPFSLTGRVLALV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatccccccgccgctatcacatcaccacctttggctgtcagatgaacaaggct
gactcggaacggatggccgggattctcgaagccctcaacttcgaggccacagaagacccg
aacctggctgacctcgtcctctacaacacctgcaccatccgcgacaacgctgaacaaaag
gtctattcctatctcggcagacaggccaaacgcaaacaaaatgaccccaacctcatcctg
gccgtcgccggttgtgtggctcagcaggaaggggaatccctgctgcgacgggttccagaa
cttgacctggtgatgggcccccaacatgctaaccgcctcggagacctcctcgaacaggtc
ttctctgggagccaggtggtggccacggaaccggtccatatcatggaggacatcaccaaa
ccccgccgggatagtgccgtcagtgcttgggtgaatgtcatttacggctgcaatgaacgc
tgcacctattgcgtggttcccaatgtgcgcggggtggaacagtcccgcaccccggaggcg
attcgcgcggaaatggaggaactggggcgacaaggctataaggaagtcaccctccttggg
caaaatatcgatgcttatggccgagatctccccggtagcacccccgaaggacgacatcta
cataccctcaccgatttactctacttcgtccatgatgtgccgggtattgaacgcatccgt
ttcgccaccagtcacccccgctacttcacggaacggctgattcgcgcctgtcaggaactg
cccaaggtctgtgaacatttccatattcccttccaatcgggggataacgagattcttaaa
gctatggcccggggctatacccatgagaaatatcgccgcattatcgacaaaatccgccac
tatatgcccgatgccgccattagtgctgatgccattgtcggcttccccggcgaaaccgag
gaacagttccaaaataccctcaagctgacggcggatattggcttcgatatccttaacacc
gccgcctactccccccgtcccggaacccccgctgctgactgggagaatcaactcagtgat
gaggtgaaacaagaccgtctgcaacggctgaatcacttggtcagtcttaaagctgctgaa
cgctctcaacgctatgcgaatcgggttgaggaggtcttagtggaggaacaaaatcctaaa
gatcccactcaggtcatgggacggactcggggcaaccgcctcaccttctttgaggggaat
ttgcaggagttgaaaggcaaaacggtctctgtggaaatctccgaggttcgcccctttagt
ttaacgggacgagttctggccttggtctaa
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