Phormidium yuhuli: NEA10_15315
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Entry
NEA10_15315 CDS
T08410
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh03030
DNA replication
pyh03430
Mismatch repair
pyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEA10_15315
03430 Mismatch repair
NEA10_15315
03440 Homologous recombination
NEA10_15315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyh03032
]
NEA10_15315
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_15315
Enzymes [BR:
pyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEA10_15315
DNA replication proteins [BR:
pyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEA10_15315
DNA repair and recombination proteins [BR:
pyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEA10_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
USR90206
LinkDB
All DBs
Position
3565762..3568422
Genome browser
AA seq
886 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLQQLVDRAAELEMPAIALTDHGVMYGAAQLVKICRGKGVK
PIIGNEMYVINGDITKQERRPRYHQVVLAKDNIGYKNLTKLTTISHLEGYQGKGIFSRPC
INKDLLAEYREGLIVTSACLGGEIPQAILRNRLDVARRIATWYKDTFGEDFYLEIQDHGS
QEDRVVNVELVRIARELDIEIIASNDSHYISCYDVEAHDALLCIQTGKSIIEDKRLRYSG
TEYLKTAEEMAQLFRDHLEDEVIEEAIANTLKVADKIKPYDLFGDTRIPNFPIPSGYTAD
TYLEDVTWAGLLERLNAKSRSELNQEYKERLEFELKMMQQMGFSTYFLVVWDYIKFARDH
NIPVGPGRGSAAGSLVAYSLRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRDDM
IHYVTEQYGVDRVAQIVTFNRMTSKAVLKDVARVLDIPYKQADQMAKMIPVSRGKPEKLK
VMISDATPVPEFKEAYDSDPIVQRWLDMAIRIEGTNKSTGVHAAGVIISADPIDEIVPLQ
RNKDGGITTQYPMEDLESMGMLKMDFLGLKNLTTIQKTLDLVQQTQGTQIDPDELTIHER
KGQAILARNPETQLPKDIQKTYKLLAEGKLEGVFQLESSGMRQVVRDLKPSCIDDISSIL
SLYRPGPLDAGLIPKFINRKHGREEIVYDHGMLESILKETYGVMVYQEQIMKIAQDMAGY
SLGEADLLRRAMGKKKMSEMQKHHGIFIDGCAKNGVDKKTAEALFDQMVKFAEYCLTYDT
EVLTVEYGVLPIGRLVEERIACQVYSVDRHGHVYTQPIAQWHDRGVQEVFEYTLEDGAVI
RATPDHKFMTESGEMLPIDEIFEQGLDLKYLKFELDRIPDLSLAAV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggcttacatattcatagcgattacagtctcctcgatggtgccagccaa
cttcagcagctcgtcgatcgcgccgctgaactggaaatgcccgcgatcgccctcacggac
catggggtgatgtacggtgcggcgcaattggtgaaaatctgccgaggcaaaggggttaaa
cccattatcggcaatgaaatgtatgtcatcaatggcgacatcaccaaacaagaacgtcgc
cctcgctatcaccaagtcgttttagccaaagataacatcggctataaaaacttaaccaaa
ctcaccaccatttctcacctagaagggtatcaaggcaaaggcattttttcccgtccttgc
atcaacaaagacctcctcgccgaatatcgcgaaggcctaatcgtcaccagtgcctgttta
gggggtgaaattccccaggcgattctccggaaccgcctcgatgtggcccgtcgtattgcc
acgtggtataaagatacctttggcgaagatttttatctagaaattcaagaccacggctcc
caagaagaccgagtagtgaatgtggaactcgtccgcattgctcgggaactcgatattgaa
attatcgccagtaacgactcccattatatctcctgttacgacgttgaagcccatgacgcg
ctgctctgtattcaaactgggaaatctattattgaagataaacgactgcgctatagcggg
accgaatacctgaaaaccgctgaagaaatggcgcaactgttccgagaccacttggaggat
gaggtgattgaggaggcgatcgccaataccctgaaagtggccgacaaaatcaaaccctat
gacctcttcggtgacactcggattcctaattttcccattccctctggctacaccgccgac
acctatctcgaagacgtcacttgggccggcttactcgaacgcctcaacgccaaaagccgt
agtgagttaaaccaagaatataaggaacgcctagaatttgaactaaaaatgatgcaacag
atggggttctctacctatttcttggtagtctgggactacatcaaatttgcccgagatcat
aacatccccgttggtcccggacgcggttcagctgctggttcgttggtcgcctattccctc
agaattaccaacattgaccccgtccatcatggcttactgtttgaacgtttcctcaacccc
gaacggaagtcaatgccagatattgatacggacttctgcatcgaacgtcgggatgatatg
attcactatgtcaccgagcaatatggggtggatcgcgtggcgcaaattgtcacctttaac
cgcatgacctctaaagcggtcttaaaagatgtggcgcgggtgttagatattccctacaaa
caagccgaccaaatggcgaaaatgattccggtctcgcggggaaaaccggaaaagttgaag
gtgatgatttccgatgcgactccagtcccggaatttaaggaggcctacgacagcgacccc
attgtccagcggtggctggatatggctatccgcattgagggaaccaataaatcaacagga
gttcacgcagcgggggtaattatttctgctgaccccattgatgaaattgtccccttacag
cgtaacaaagatggggggattactacccaatatcccatggaagatctagaatccatggga
atgttgaaaatggactttttgggattaaaaaacctaaccacgattcaaaaaactttggat
ttggtgcaacaaacccaaggaacccaaattgaccccgatgagttgactattcatgaacgg
aaaggtcaggcgattctagcgcgaaatcctgagactcaattacccaaagacatccaaaaa
acctataaactcctcgccgaaggaaaactcgaaggggtgtttcagttggaatcctcgggg
atgcgccaggtggtacgggatttgaaaccctcttgtattgatgatatttcctcaattctc
tcactttaccgtccggggccattagatgcgggtctgattcctaagtttattaaccgcaaa
catggtcgtgaggaaattgtttacgaccatgggatgttggagtcgattcttaaggagact
tatggggtaatggtctatcaggagcagattatgaaaatcgctcaggatatggcggggtat
tctttgggggaagcggacttgctgcgtcgggccatgggtaagaaaaagatgtcggagatg
cagaagcatcatggcatttttattgatgggtgtgccaagaatggggtggataaaaagacc
gctgaggctctgtttgaccagatggtcaagttcgctgagtattgtttgacctatgacacc
gaagttttgacggtggagtatggagtgttacccattggtcgccttgttgaagaacgaatt
gcttgtcaggtgtatagtgttgatcgccatggtcatgtctatactcaacccattgctcag
tggcacgatcgcggtgtgcaagaggtgtttgaatataccctagaggatggtgcggttatt
cgcgccacgccagaccataagtttatgactgagtcgggtgaaatgctacccattgacgag
atttttgagcaaggtctggatcttaagtatctcaagtttgagctagatagaattccggac
ttgtctttggctgcggtttaa
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