Phormidium yuhuli: NEA10_15330
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Entry
NEA10_15330 CDS
T08410
Name
(GenBank) OB-fold nucleic acid binding domain-containing protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh03030
DNA replication
pyh03430
Mismatch repair
pyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEA10_15330
03430 Mismatch repair
NEA10_15330
03440 Homologous recombination
NEA10_15330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyh03032
]
NEA10_15330
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_15330
Enzymes [BR:
pyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEA10_15330
DNA replication proteins [BR:
pyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEA10_15330
DNA repair and recombination proteins [BR:
pyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEA10_15330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
DUF655
Nitr_red_bet_C
PPIP5K2_N
Motif
Other DBs
NCBI-ProteinID:
USR90209
LinkDB
All DBs
Position
3576533..3577876
Genome browser
AA seq
447 aa
AA seq
DB search
MVKICSRRRVGVQQVYDIGVAKDHNFLLKTGLVASNCFNKSHSMAYGYVTYQTAYLKANY
PVEYMAALLTANSGNQDKVQKYIATCMGMNITVQPPDINHSNVDFTPVEGKKILFGLSAV
RNLGQGAIDCILKAREEEPFESLAQLCDRVDLHAVNRRALEALIQCGALDTLNPNRKQLM
EHLPFVIDWAQSRAKERSVGQFNLFDQLGEESQSRQDDNGFDGVPQAPQVQDYQPMEKLK
LEKELLGFYVSDHPLKPIQKTARLLAPVNLNEMEDQHEKVMVSAIVMLSGLKPIVTKKGD
RMAIVQLEDLTGQVEAVVFPRTYERVHQHLIEDARLIVWGKVDRRDDSVQLIVEDAEPIE
RVQMVLVKLNPEQAGDIQQRHQLRDVLRSQVPEDGKPKVPVIGVIAAGHQRHLVRLGHQF
QVMDCDQAVAALNRAGYPARRHALAKV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaatttgctcgcgccgtcgagttggtgttcaacaggtgtacgatattggagtc
gcaaaagaccataatttcctcttaaaaacaggtcttgtggcgtctaattgctttaataaa
tctcactcgatggcatacgggtatgtcacctatcaaactgcttatttaaaagccaattat
cctgttgaatatatggcggcgttgttaaccgccaacagtggaaatcaggacaaggtacag
aaatatattgccacctgcatgggaatgaacattaccgtgcagccgccggatattaatcac
tccaatgtggactttacacccgtagagggaaaaaagattttatttggactctcggcggtg
cggaatttgggtcagggggcgattgattgtattctgaaggcgcgagaggaggagccgttt
gagtctctggcccagttgtgcgatcgcgttgatctccacgcagtcaaccggcgggcctta
gaagccttaatccaatgtggggccctcgatactctcaaccccaatcgtaagcaattgatg
gaacatctgccattcgtcattgattgggcgcaatcccgggccaaggaacgcagcgtgggc
cagtttaatctgtttgaccaacttggggaagagtctcaaagccgccaggatgataatggc
tttgatggggttccccaagccccccaggtgcaggattaccagccgatggagaagctaaag
ctggagaaggaactcctcggcttctatgtctctgatcatcccctgaaacccattcagaaa
acggcgcgactgctggccccggtgaacctcaatgaaatggaagaccaacatgagaaggtg
atggtgagtgctattgtcatgttgagtggtctcaagccgattgttaccaaaaagggcgat
cgcatggccattgtccaactcgaagacctcacgggccaagtggaggcggtggtgttccct
cgcacctatgagcgggttcaccaacatctgattgaagatgcgcggttgattgtttgggga
aaagtcgatcgccgtgatgatagcgtgcaattgattgttgaggatgccgaacccatcgaa
cgggtgcagatggtgctggtgaaactcaatcctgaacaggctggggacatccagcaacgc
catcaactgcgggatgtgttgcgatcgcaggttcccgaagatggcaaacccaaagtgccg
gtgattggcgtgattgcagcgggccaccaacgtcacctggtgcggctgggccatcaattc
caggtgatggattgtgatcaggcggtggcggccctgaatcgggccggctatcccgctcgt
cgccatgccttggccaaagtctag
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