Phormidium yuhuli: NEA10_16215
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Entry
NEA10_16215 CDS
T08410
Name
(GenBank) PAS domain S-box protein
Organism
pyh
Phormidium yuhuli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_9
PAS_8
PAS_4
HATPase_c
GAF
HisKA
GAF_2
PAS_11
GAF_3
HATPase_c_2
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
USR90369
LinkDB
All DBs
Position
complement(3783956..3789316)
Genome browser
AA seq
1786 aa
AA seq
DB search
MTLDAAVLSTLIARLERLEQQRQLHQAVVNTLPVACLYLDCHGTIHFANQGALRQLNCEP
EDCLGQSLLSWLSPGDGERLLEELNNLDRNSDEDCPFFLQQFHLPGGDVQRLRTFVCPLP
SFSESLPMILMHWEPVPRLPAAVKVSNQALDSFLNPQEQRSPLQQVALQLRAMIFDYVVY
PDGHDSIPYVSANCEDIFEISAEQIQGDSSQLWQLMDTADVPFAQQLIAHSAKTLTPWNF
EWRVRLPSGRTKWLQGLSYPHRHEDGRVVWNGMIFDITDHKQTEDDLYNLAQRLLTIIET
VEEGITLSDDGDNFGLFNAKMSEITGYSGTEAQESESFLAKLYPDPQALAEAAERLVEVR
ETGCLRNLETTIRAKDGSFKTLLVSTTHFPLAERNCYLSAYRDITERRQAYEQLRQSQEF
IEAIANASPQILYTIDAQTLCLNSVNGQVQSILGYSPDDLVGKPFKTWQSFYHPEDLPTL
HAYFASWQGLGDGEIIECQYRVRHADQSYRWLRSRDVVFKRDEQGRVQQILGTASDITEH
QFAEASLRASEAALRASQERLNGILSSLDDAVWSMCPHTLQLLYISPSVEKLYGRSPEKL
ARMKNPWMRNIHPGDRATFVRQWRHLTSQGSVDIEYRILVRVQTREEDLHSQPGRRPNRK
ERWLRLRARLVHDEQGIPLRIDGISSDITELKETEIALRASEERFRSLVANVPGVIYRVL
PNEGWTTLFVSDAIEEMTGYSAQTFLKDGNLWPKIIYRKDFPRISQLINHAITRRQPYAF
ECRILCADGSLRWIYERGQGMWDQWGNLLYLDGAMVDLTDRKRNEEMLQRQAQRDRLLTT
LSQRIRESLNLDEILDRTVREVRHSLQADRVLIIRLQQPSSSEVVSEAVIPPYEPTLGQQ
FYDGEFPTHCYQAYAEGQSRLMVAPDMTCEDGTCLSQLGVMQVRSQVVIPILHPSAMGAS
LWGLLVAHQCSSSRHWLDWEVDMLGQLADQVSIAIGQANLYTQVQQSETRLRAMFEQAAV
GMAILDAQGQICQTNKTLLQILGHQLPLLQIETLGPEAMLREQEWEQCYERSDGSLVWVQ
LNLSSFPKQGELKGCFLLIVQDISDRKRAELRLQQQLHFETALARFSSSLTSNNVVDWTS
LLGLIGRSLQGSRVYLNRFNWSEHIAHWMAEWVDEQTPTLFGKAPRISLDDFPWWLGKLQ
HNQDVIIPHRDQLPPEAAAERALFQDSGETSLLEVPIWSRQRELWGFLGISIIHDTPRHW
SDEEARLLRVVGEIIYNYCDRCLVEQALRDSEERFRVTFEQAAVGLAQLDFQGNFLRVNR
RYCTLLGYEPEDLLQRNLGDVLSHDDWVESLENLQKMQSGKLETCAKEKRQRRRDGSLRW
AQVTGQVVFEGKKPKYVIYAAADIHDRKQYQSALERLRHRYELILNAAGEGICELNLRQQ
IAFCNPTAARMLGSDRVAQIIGLSIHQIIEPLPSPHGESSGDVSWQQIWQTQVTELEDST
AAGQSPSIHQAQFRRLDGGTFPVDYICTPIVLNGQHLGAVLTFKDISDRLAIEKLKNEFL
SMVSHELRTPLTPMQVALGLLNSGKLGPLSEKAQHLVSIALSNTNRLRRLIDDLLDFQRL
ESGRVELDYQQYYLFDLLQQSLETMAAMAESEQISLEIAPTDENLQELQIWGDGDLLIQV
LTNLVSNAIKFSPVGGQVLLAVEAWPKSGEICIRVCDRGRGIPPNCLELIFDPFHQVDTS
DSREKGGTGLGLTICRRIVEQHQGRIWAENRPDGGTQISLTLPWQP
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgatgctgccgtcttgtcaacgctgatcgctcgcttggaacgattggagcaa
cagcggcagcttcatcaagccgtggtaaatacgttaccagttgcttgtttatatcttgac
tgccatggaacgattcactttgccaaccagggagcattgcgacagctcaattgtgaacca
gaggactgtctgggtcagtctcttttatcatggttatcgcctggggatggagagcgcctc
ttagaagaactcaacaatcttgatcgcaacagcgatgaggactgccccttctttctgcag
cagtttcacctccctgggggggacgtgcaacgactcagaacctttgtctgtcctcttccg
agtttctcagagagtctccccatgattttgatgcattgggagccggttcccaggctgccg
gccgccgtaaaggtcagcaatcaggctctagactcatttctcaatccccaggaacaacgc
agtcccctgcaacaagttgcccttcagctgcgggctatgatttttgactatgtggtgtat
cctgatggtcacgatagcatcccctatgtcagtgctaactgcgaagatatctttgagatc
agcgctgaacagattcagggggatagtagccagctctggcaactgatggatacggccgat
gttccatttgctcaacagttgatcgcccattccgctaaaaccctgaccccctggaacttt
gaatggcgcgtccgtctcccctcaggtcgtacaaaatggcttcaggggctgtcctatccc
catcgccatgaggatggccgggtggtctggaatggcatgatctttgacattaccgatcat
aaacagacggaagatgacctctataacttagcccagcgactgctgacaattatcgaaacc
gtcgaagaaggcatcaccctcagcgatgatggggataactttgggctgttcaatgccaaa
atgtcagaaatcaccggctacagtggcacggaagcccaagagagcgagagttttttagcc
aaactttaccctgatccccaggcccttgccgaagccgctgagcgtctggttgaagtgcga
gaaacaggttgtctgcggaacttagaaacgacgatccgagccaaagatgggagtttcaaa
accctactggtgtccaccacccattttcccctggccgaacgcaattgttatctgagtgcc
taccgcgacattaccgagcgacgacaggcgtatgaacaactacgccagagtcaagagttt
atcgaagccatcgccaacgcctcgccccagattctctatactattgatgcccaaacccta
tgcctcaactccgtcaatgggcaagtgcaatccattttaggctattcccccgatgacctg
gtgggaaaaccctttaagacctggcaatccttttatcatcccgaagatttgccaacctta
catgcctattttgcctcctggcaagggttaggggacggtgaaattatcgaatgtcagtat
cgtgtacgccatgctgatcagagttatcgctggttgcgatcgcgcgatgtggtctttaaa
cgagatgagcagggacgggtacaacagattctcgggaccgccagtgatattaccgaacac
caattcgcagaagcctctctgcgggccagtgaagcggccttacgagcgagtcaggagcgg
cttaacggtattctctcctccttagatgatgctgtttggtccatgtgtccccacactctg
caactgctttatatcagtccctcggtggagaaactctatggtcgttcgcccgagaaactg
gcccggatgaagaacccctggatgcgtaacatccatcccggcgatcgcgctacctttgtc
cgtcaatggcgacatctaacaagccaagggagcgtcgacattgaatatcgcatcctagtc
cgggtacagacccgggaggaagatctccatagccaaccgggacgacgacccaatcgtaaa
gaacgttggctacgactgcgagcacgactggtacatgacgagcagggcattcccctgcgc
attgatggcatcagcagtgatatcacggagttaaaagagactgaaattgcgttgcgagcc
agtgaagagcggtttcggtctttggtggccaatgtgccgggggtcatttaccgggtgtta
cccaatgagggttggaccaccttatttgtcagtgatgcgatcgaagagatgaccggctac
tccgcgcaaacctttctcaaagatggcaatttatggcccaaaattatctatcgtaaggat
ttcccccggattagccaactgatcaaccacgccattactcggcgacaaccctatgccttt
gaatgtcgaattctctgtgctgacggttccctgcgctggatttatgagcggggccagggg
atgtgggatcaatgggggaacttactttatcttgatggggcgatggtggatttgaccgat
cgcaaacgcaatgaagaaatgttgcaacgtcaggcccaacgcgatcgcctcttaaccact
ctcagccagcgcattcgtgaatctctgaatctggacgagattttagaccgcaccgtccgg
gaagtacgccattccctccaagccgatcgggtgttaattattcgcttacaacaacccagt
agtagcgaggtggtcagtgaggctgtcattcctccctatgagccgaccctgggccaacag
ttctatgacggcgaatttcccactcactgttatcaagcctatgccgagggacaatcgcgg
ctgatggtagcccctgatatgacttgtgaggatggcacctgcctgagccagttgggggtt
atgcaggttcgctcccaggtcgtcattcccattcttcatccctcggcgatgggagcgagt
ctttggggattgttagttgctcatcaatgttcctcttcacgccattggctagattgggaa
gtggatatgttaggtcaactggcagaccaagttagtattgccattggccaggccaatctc
tatacccaggttcaacaaagtgaaacgcgcttgcgggcgatgtttgagcaggccgcggtg
ggcatggcaattctagatgctcagggccagatttgccagaccaataagaccttgctccag
attttaggccatcagttgcccctgctccagattgagacccttggacccgaggcgatgctg
cgagaacaagaatgggagcaatgttatgaacgctccgatggctccctggtttgggttcag
ttgaatctctcgtcatttcccaagcaaggggagttaaagggctgctttttgctgattgtt
caggatattagcgatcgcaaacgggccgagttgcggctgcaacaacagttgcattttgaa
acggctttagctcggttttccagtagcctcaccagtaataatgtggtggattggacgagt
ttattaggcttaattgggcgatcgctccaggggagtcgggtttatctcaaccgcttcaat
tggtctgagcacatcgcgcattggatggcagaatgggtggatgaacagacaccaaccctg
tttgggaaggccccaaggatttccttggatgatttcccttggtggcttgggaagctgcaa
cataaccaagatgttatcatcccccatcgagaccagttaccccccgaggcggcggcggaa
cgggccctgttccaagatagcggggagacctccctactcgaagttcccatttggagccgc
cagcgagaactctggggctttttggggattagtattatccatgatactcctcggcactgg
tctgatgaagaagctcgtttgttgcgggtggtgggggagattatttataactactgcgat
cgctgcctcgtcgaacaggccctgcgcgatagtgaagaacgtttccgagtgacctttgaa
caggcagcagttggcttggctcaattagactttcaaggcaattttctacgggtgaatcgc
cgctactgcaccctgctcggctatgaacccgaagacctgttacagcggaatctcggggat
gttctcagtcacgatgactgggtcgaatccttagagaacctacaaaagatgcaatcaggc
aagctagagacctgtgctaaggaaaaacggcaacggcgacgggatggctcactacgctgg
gcccaagtgaccggtcaggtggtatttgaggggaaaaagcctaagtatgttatctatgcg
gcggctgatattcatgaccgcaagcagtatcagtcagccttggaacggttgcgccaccgg
tacgagttgattttaaatgcagcgggagagggaatttgtgagctgaatttacgccagcag
atcgccttttgtaatccgacagcggcccggatgttgggaagcgatcgcgtggcccagatt
attggcttatccatccatcagattatcgagccactcccttccccccatggagagtcctcg
ggagatgtctcctggcaacaaatttggcagactcaggttacagaactggaggactccacc
gctgccggacaatctccctcgattcatcaagctcagtttcgccgcctggatgggggaacc
tttcccgtcgattatatctgtactccgattgtcctgaatgggcaacatctcggggcggta
ttgacctttaaagatatcagcgatcgcctagccatcgaaaaactgaaaaatgagtttctc
tccatggtcagtcatgagttgagaacccccctaactccgatgcaggtagctctgggactg
ctcaacagcggtaagttaggtcctctgtctgagaaggctcaacatctcgtctctattgcc
ttgagtaatacaaatcgcctacgccgcttgattgatgatttgctggacttccaacgtctg
gagtcggggcgggtggagttagattatcaacagtattatctcttcgacctgctacaacag
agcctagaaaccatggccgctatggctgagtcggagcagatttccctggagattgcccct
acagatgagaatttgcaagagttacagatttggggggatggagatttactgattcaggtc
ttgacaaatttagtgagtaatgctataaaattttctcccgttggaggtcaggtgctctta
gcggtggaagcctggcccaagtcgggggagatttgtatccgggtttgcgatcgcggtcgc
ggcattccccctaactgtctagaactcatctttgaccccttccatcaagtggatacctca
gattctcgggaaaaggggggaaccggtttaggactgaccatctgtcgccgcattgttgaa
cagcaccaaggacgcatctgggccgaaaatcgcccagatggtgggacacaaatttccctg
acgctaccctggcaaccctga
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integrated database retrieval system
