Phormidium yuhuli: NEA10_18635
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Entry
NEA10_18635 CDS
T08410
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pyh
Phormidium yuhuli
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pyh03400
]
NEA10_18635
Enzymes [BR:
pyh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NEA10_18635
DNA repair and recombination proteins [BR:
pyh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NEA10_18635
Prokaryotic type
NEA10_18635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
USR90813
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All DBs
Position
complement(4320292..4321728)
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AA seq
478 aa
AA seq
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MTNLVLFWHRRDLRLTDNVGLAEAFEHSPNLVSCFCFDPDILERDDIAPARMAYLLGCLE
SLEKAYRELGGHLLFLRGKPEDKIPELAQALGARAVYWNQDVEPYGRERDRRVKERLTQQ
SVEVHECWDQLLHPPGEVLTGTSNNCKPYTVYTPYWKNWSRQPKDQPITPPDSLQGLSEK
DEQGLEGVGAIALPSLRDLGFTWDAPLILEPGEAAAKAQLESFCNQAIYSYDEQRNFPFN
DGTSRLSPALKFGAIGIRDVWRATELVMDTTRSDEGRDNILSWQQELAWREFYQTVMYFF
PELAEGPYREPWDRFPWQNDEQKFAAWCEGKTGFPIVDAAMRQLNQTGWMHNRCRMIVAS
FLTKDLIINWQWGEKYFMQTLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAKKYDP
EAEYIRHWLPEIRALETKDLVTGNIAPLDCEACGYPRAIVNHNEQQRLFKQIYKDLKG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactaacctggttttattctggcatcgacgagacttacgactgaccgataatgttggc
ttagctgaagcgtttgaacacagtcctaacctcgtttcctgcttttgttttgatccagat
attctggaacgagatgatattgcgccggctcgtatggcttacctattgggttgtttagag
tccttagaaaaggcctaccgtgaactaggcgggcatttattatttctacggggtaaaccc
gaggacaaaattcccgaactagcgcaagctttaggggcgagggccgtctattggaatcag
gatgtagaaccttatggccgggagcgcgatcgccgggttaaggaacgcttaactcagcaa
agcgtggaggttcacgaatgttgggatcaactgctgcatcctccgggagaggtcttaaca
ggaaccagtaataactgtaagccttatacagtctatactccctattggaaaaactggagc
cgtcagccgaaagaccaacccattaccccgccagactccttgcaaggactgagcgagaag
gacgagcagggattggagggggtgggggcgatcgccctgcctagcttaagggatttaggc
tttacttgggatgcgccgctcattttggaaccgggagaagcggccgcgaaagcacagtta
gagtccttttgtaatcaggcaatttatagttatgatgagcagcgaaatttcccgtttaat
gatggaacctctcgtttgagtccggccttgaaatttggggcgatcggtattcgtgacgtt
tggcgtgccactgagttggtgatggacaccactcggagtgatgaaggtcgagataacatc
ttgtcctggcagcaggagttagcctggcgggagttttatcaaacggtcatgtactttttc
ccggaacttgctgagggtccctatcgcgaaccctgggaccgcttcccttggcaaaatgat
gaacagaagtttgcggcttggtgtgagggaaaaacaggatttccgattgtggatgccgcg
atgcgacaactcaatcagaccggctggatgcacaatcgttgtcgcatgattgttgccagt
ttcttgaccaaagacttaattataaattggcaatggggggagaaatactttatgcaaacc
ctcattgacggcgatttatcggcgaataatgggggctggcaatggagtgcatcgagtggc
atggacccgaaacccttgcggatttttaacccggcgagtcaagccaagaaatatgacccc
gaggctgagtatatccgccactggctgccggagattcgcgccttggagacgaaagattta
gtgacggggaatattgccccgttggattgtgaggcttgtggttatcctcgggcgattgtt
aatcataatgaacaacaacggctgtttaagcagatttataaggatttgaagggttaa
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