Pseudomonas yamanorum: AK972_0268
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Entry
AK972_0268 CDS
T05821
Name
(GenBank) putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pym
Pseudomonas yamanorum
Pathway
pym00260
Glycine, serine and threonine metabolism
pym01100
Metabolic pathways
Module
pym_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AK972_0268
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_9
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
OPT
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
AMW81068
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Position
271965..273905
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AA seq
646 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVNMWRRGRSSNVDLIGGLLAMPKRYMVDLHHVVARD
KYIANTHVATALGFVLSALLAILVHGFGLHNRILGYALLLASVLMFIGATFVYLRRRNPP
ARLSKGPWMRLPKSLMAFSVSFFLVTLPVAGILPADFGGWLLAALLSLGVLWGVSEMFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLTDKTAPLGVEKPVDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKAIGEHSG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLPLLSDKKAVDVLFWVGDGAFDMRNQRTLRSFVK
VLKAAKVDFAVLGLEERDSGDVARRLGDEATFQLLAARNIQTLAKYSFKRIVTCDPHSFH
VLKNEYGAFDGNYLVQHHSTYMAELIDAGALNLGQHKGNSVTYHDPCYLGRYNGEYEAPR
QVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPLIKDIAELVADALLEDAAPVKTPKRETAEVH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacccttcttcccatcctgctcttcgccgccctgggccttgccgtcctcggc
gccctgcgccgggtgaacatgtggcgccgcggccgctcctccaacgtcgacctgatcggc
ggcctgctggccatgcccaagcgctacatggtcgacctgcaccacgtcgtcgcccgcgac
aaatacatcgccaacacccacgtcgccaccgccctgggctttgtgctctcggcgttgctg
gcgatcctggtgcacggtttcggcctgcataaccgcatcctcggctacgccttgctgctg
gcctcggtgctgatgtttatcggcgccacgttcgtctacctgcgtcgtcgcaatccacct
gcgcgcctgtcgaaaggcccgtggatgcgcctgccgaaaagcctgatggcgttctcggtg
agcttcttcctggtgaccttgccggtggccgggattctgccggcggacttcggcggctgg
ctgctcgccgcgctgctgagcctgggcgtgttgtggggcgtgtccgagatgttcttcggc
atgacctggggcggcccgatgaaacacgccttcgccggtgccctgcacctggcctggcac
cgccgcgccgagcgtttcggcggtggccgttccaccggtttgaagcctctggacctcacc
gataaaaccgcgcccctgggtgtggaaaaaccggtggatttcacctggaaccaactgctc
ggcttcgacgcctgcgtgcagtgcggcaagtgcgaagcggcgtgcccggcgttcgccgcc
ggccagccgctgaacccgaaaaaactcatccaggacatggtggtcggcctggccggtggc
accgacgccaagttcgccggcagtccttatcctggcaaagccatcggcgaacacagtggc
aacccgcaccagccaatcgtcaacggcctggtggatgcggaaaccctgtggtcctgcacc
acctgccgcgcttgcgtggaggagtgcccgatgatgatcgagcacgtggacgccatcgtc
gacatgcgccgtcacctcaccctggaaaaaggcgcgaccccgaacaagggcgccgaagtc
ctggaaaacctgatcgccaccgacaaccccggcggctttgcacccggcgggcggatgaac
tgggcggcggatttgaacctgcccttgctcagcgacaagaaagccgtcgacgtactcttt
tgggtcggcgacggcgccttcgacatgcgcaaccagcgcaccctgcgttcgttcgtcaaa
gtcctgaaagcggccaaggtcgacttcgccgtactgggccttgaagagcgcgacagcggt
gacgtggcccggcgtctgggcgatgaagccaccttccagctgctggccgcgcgcaatatc
cagaccctggccaagtacagcttcaagcgcatcgtcacctgcgacccccacagtttccac
gtgctgaaaaacgaatacggcgccttcgatggcaactacctcgtgcagcaccacagcacc
tacatggccgagctgatcgacgccggcgccctgaacctgggccagcacaaaggcaacagc
gtgacctatcacgacccctgctacctgggccgctacaacggcgagtacgaagctccgcgc
caagtgctgcgggcgctggggatcgaggtcaaggaaatgcaacgttccggtttccgttcc
cgctgctgcggcggcggtggcggggcgccgatcaccgacattcccggcaagcagcggatt
cccgacatgcgcatggaagacatccgcgaaaccggcgccgagctggtggccgtgggttgt
ccacagtgcacggcgatgcttgagggcgtggttgagccgcgtccgttgatcaaggacatc
gccgagctggtggccgacgcgttgctcgaagacgccgcaccggtcaagaccccgaaacgc
gaaactgcggaggtgcattga
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