Pseudomonas yamanorum: AK972_0277
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Entry
AK972_0277 CDS
T05821
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00260
Glycine, serine and threonine metabolism
pym00460
Cyanoamino acid metabolism
pym00630
Glyoxylate and dicarboxylate metabolism
pym00670
One carbon pool by folate
pym00680
Methane metabolism
pym01100
Metabolic pathways
pym01110
Biosynthesis of secondary metabolites
pym01120
Microbial metabolism in diverse environments
pym01200
Carbon metabolism
pym01230
Biosynthesis of amino acids
pym01240
Biosynthesis of cofactors
pym04981
Folate transport and metabolism
Module
pym_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AK972_0277
09102 Energy metabolism
00680 Methane metabolism
AK972_0277
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AK972_0277
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AK972_0277
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AK972_0277
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AK972_0277
Enzymes [BR:
pym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AK972_0277
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AMW81077
UniProt:
A0A143GA17
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All DBs
Position
282698..283951
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEVLAIERAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTATGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEAQEPGFKAYQQQVIENAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCLELAGWICDILDNLGDADVEANVAKHVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttatgacgatgcactgctggcggccatgaat
gccgaggagcagcgccaggaagatcatatcgagctgatcgcgtcagagaactacaccagc
aagcgtgtcatggaagcccagggcagcggcctcaccaacaagtacgccgaaggttatccg
ggcaagcgttactacggcggctgcgagcacgtggacaaggtcgaagtgctcgccatcgag
cgtgccaagcaactgttcggtgccgattacgccaacgtgcagccgcactccggttcgtcc
gccaacagcgcggtgtacctggcgctgctgaacgccggtgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgcggtgcaatacggcatcgacaccgccaccggcctgatcgactacgacgaagtcgag
cgcctggccgtggagcacaagccgaagatggttgtggccggtttctccgcctactccaag
accctggatttcccgcgcttccgtcagattgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtcgccggcctggtggccgctggtctgtacccgaacccgctgccctac
gccgatgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcgggttgatc
ctggcgaagtccaatgaagaaattgaaaagaaactcaactctgcggtattcccaggcgcc
cagggcggcccgttgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcccag
gagccaggtttcaaggcttaccaacagcaagtgatcgaaaacgcccaagccatggccggc
gtatttatcaagcgcggctacgatgtagtgtccggcggcaccgataaccacttgttcctg
gtcagcctgatccgtcagggcctcaccggcaaggacgcggacgcagccctcggtcgcgcc
cacatcaccgtcaacaagaatgccgtgcctaacgacccgcagtcgcccttcgtgacttcg
gggctgcgcatcggcacaccggcggtgaccacacgtggtttcaaagtgacccaatgcctg
gagctggccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtggaggcc
aacgtcgccaagcatgtggccgccctgtgcgctgatttcccggtttatcgctga
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