Pseudomonas yamanorum: AK972_0487
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Entry
AK972_0487 CDS
T05821
Name
(GenBank) Nitrogen regulation protein NR(I)
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_0487
Transcription factors [BR:
pym03000
]
Prokaryotic type
Helix-turn-helix
Other families
AK972_0487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS_4
AAA_5
HTH_23
PAS_9
HTH_7
HTH_50
PAS_8
HVO_A0261_N
AAA_2
HTH_30
HTH_22
HTH_28
HTH_17
AAA
HTH_20
HTH_32
RWP-RK
Diguanyl_cycl_sensor
nSTAND3
IclR_C
HTH_AraC
Mga
Enkurin
Motif
Other DBs
NCBI-ProteinID:
AMW81287
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Position
515434..517338
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AA seq
634 aa
AA seq
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MQNDHFSRHAQQVLTVTRGQDPLHGPGSDPSIARSWLRCLEDYHLDPALTIAPTVLEHDR
LLESRERLQQVLSIAGSEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQSLTIHRDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSAREAVSRQSQFHTMALVNLSAKMIESCYFLRHFEHHWLLRFHLQAESVGLFSEGLLA
FDGDGRICAVNQSALNLLGQIRGGLLGQPVEAFFDCSLDELLGRASANASASWPLRTRDG
RGLFAVLRGQPRSVPVPIPQALPERPRLPGICLGDAALQNDFRKALRVFERDVPLLINGE
TGSGKEAFAKAVHHASLRADKAFIALNCAAIPESLIESELFGYRGGSFTGARKEGMRGKL
QQADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPIGGEPQAVNVRIISATHRNLLERVE
DGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEETGDQPVLLDSPARQALLAFAW
PGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARAQPAVVEDRSDSPLDDAERLALLN
ALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgatcatttcagtcgccatgcccagcaagtcctgacggtcacccgagggcag
gacccgttgcacggccccggcagcgatccgtccatcgcccgctcctggctgcgttgcctg
gaggactatcacctcgaccccgcgctgaccatcgcgcccacggtgctcgaacatgatcgc
ctgctggaaagccgcgaacgcctgcaacaagtgttgagcatcgccggcagcgaaatgaac
agcctgcaccaacagctctccggcgctggtcacgcggtactgctgaccgacgcccgtggg
gtgatcctcaactgcgtcaccgcccccagtgagcgcaagattttcgaacgtgccggcctg
tggctgggcgccgactggagcgaggcctgcgaaggcaccaacggcatcggcacctgcctg
gtggagcgccagtccctgacgattcatcgcgatgaacacttccgtggccgacacaccggc
ctgacctgctcagccagcccggtgttcgacccccatggcgagctgctggcggtgctggat
gtgtcttcggcccgggaggcggtgtcgcgccagagccagttccacaccatggcgctggtc
aatctttcggcgaagatgatcgagagctgttacttcctgcggcattttgagcaccactgg
ttgctgcgctttcatttgcaggcggagtccgtgggcctgttcagtgaggggttgctggcg
ttcgatggcgacgggcgcatttgtgcggtgaaccagagtgcgttgaacctgcttgggcaa
atccgtggcggcctgttggggcagccggtggaggcgtttttcgattgctccctggacgag
ttgctcgggcgtgccagcgcgaatgccagcgccagttggcctctgcgtacccgcgatggc
cgtgggttgttcgcggtgttgcgcggccagcctcgcagcgtgccggtgccgattccccag
gccttgcccgaacggcctcggttgccgggcatttgcctgggagacgcggcgttgcaaaac
gatttccgtaaggcgttacgtgtgtttgagcgcgacgtgccgttgctgatcaatggcgaa
accggctccggtaaggaggcgtttgccaaggcggtgcaccatgccagcctccgggccgac
aaagcctttatcgccctgaactgcgcggccatcccggaaagcctgatcgagagcgagctg
ttcggctatcgcggcggcagcttcaccggcgcccgcaaggaaggcatgcgcggcaagctg
caacaagcggatggtggcacgttgtttctggatgaaatcggcgatatgcccctcgctttg
caaacgcgcctgttaagggttttggaggatcgacttgtcgtgcccatcggcggcgaaccg
caggcggtgaacgtcagaatcatcagcgccacccaccgtaatttgctggagcgggtagag
gacggcagttttcgcgaagacctgtactaccggctgaacggtctggaaatcgccctgccg
ccgttgcgtgagcgcagcgataagtcgcaactgctcgactttctattggctgaggagacg
ggcgaccagccggtgttgctcgacagccctgcgcgtcaggcactgttggcatttgcctgg
ccgggcaatgtacggcagttgcgcacggtgctgcgcacgttggcggcattgtgtgacgac
ggacggattgggctcgaggacctgccggcggtcattcgccaggcgcgcgcgcagccggca
gtagtggaggaccgttcggattcgcccttggacgatgcagagcgtctggcgctgctcaat
gccttggagcaacagcgctggcacatgagccacacggcggagcaactgggggttagccgt
aacaccttgtatagaaaactgcgcaaacacgggatcgcccgttag
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