KEGG   Pseudomonas yamanorum: AK972_0589
Entry
AK972_0589        CDS       T05821                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
pym  Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:pym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pym03400]
    AK972_0589
DNA repair and recombination proteins [BR:pym03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AK972_0589
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI Lon_C AAA_16 DnaB_C GvpD_P-loop AAA_22 SLFN-g3_helicase RecA AAA Rad51 AAA_24 nSTAND3 DUF7125 AAA_14 NTPase_1 MCM zf-C2H2_6 AAA_29 DUF7129
Other DBs
NCBI-ProteinID: AMW81389
UniProt: A0A143GAY3
LinkDB
Position
621754..623121
AA seq 455 aa
MAKAKRMYGCTECGATFPKWAGQCTECGAWNTLTETMIESGGAVAPSGRSGWTGQQTQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEMPPGLQVIGVTRLEQALDALFE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcaaaggccaagcgcatgtatggctgcacggagtgcggcgcgacctttcccaagtgg
gccggccagtgcactgaatgtggtgcctggaacaccttgaccgaaaccatgatcgaaagt
ggtggtgccgtggcccccagcggccgttccggctggaccgggcagcaaacccagatcaag
accctggcggaagtcagtgttgaagaaattccgcgtttctccacagcctccggtgagctg
gaccgggtgctgggcggcggcctggtggacggctcggtggtgctgattggcggtgacccg
ggcatcggtaaatccacgatcctgctgcaaaccctgtgcagcatcgccagccgcatgccg
gcgctgtatgtcaccggtgaagaatcccagcagcaagtggccatgcgtgcgcgccgcctg
ggcctgccccaggaccaactgcgggtgatgaccgaaacctgcatcgaaagcatcatcgcc
accgcgcgcctggaaaagcccaaggtgatggtgatcgactcgatccagacgattttcacc
gaacaactgcaatcggctccgggtggcgtgtcccaggtgcgggaaagtgccgcgctgctg
gtgcgctatgcgaaacagagcggcacggcgattttcctggtgggccacgtgaccaaggaa
ggcgcgctggccggcccgcgggtgttggaacacatggtcgacaccgtgctgtatttcgaa
ggcgagtccgatgggcggttgcgtttgttgcgggcggtgaagaaccgttttggcgcggtc
aacgagctcggagtgttcgccatgactgaccggggcttgaaagaagtctccaacccgtcg
gcgatttttcttacccgtgcccaggaagaagtcccgggcagtgtggtgatggcaacgtgg
gaaggcacccgcccgatgctggtggaagtgcaggcgctggtggatgacagccacctggcc
aacccgcgccgcgtcaccctgggcctggatcagaaccgcctggcgatgttgctggcggtg
ctgcaccgccacggcggcattcccacccatgaccaggacgttttcctcaacgtggtgggc
ggggtcaaggtattggaaaccgcgtctgacttggcattaatggcggcagtgatgtccagc
ctgcgcaaccggccgttgccccacgacttgctggtgttcggcgaagtgggcctgtcgggt
gaagtgcgcccggtgcccagcggccaggagcgcctgaaggaagcggccaagcacggcttc
aagcgcgccatcgtgcccaagggcaatgcgccgaaagaaatgccaccggggctgcaagtg
atcggggtgacgcgcctggagcaggcgctggatgccctgttcgaatag

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