Pseudomonas yamanorum: AK972_0589
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Entry
AK972_0589 CDS
T05821
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_0589
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AK972_0589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
SLFN-g3_helicase
RecA
AAA
Rad51
AAA_24
nSTAND3
DUF7125
AAA_14
NTPase_1
MCM
zf-C2H2_6
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AMW81389
UniProt:
A0A143GAY3
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Position
621754..623121
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCTECGAWNTLTETMIESGGAVAPSGRSGWTGQQTQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEMPPGLQVIGVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggccaagcgcatgtatggctgcacggagtgcggcgcgacctttcccaagtgg
gccggccagtgcactgaatgtggtgcctggaacaccttgaccgaaaccatgatcgaaagt
ggtggtgccgtggcccccagcggccgttccggctggaccgggcagcaaacccagatcaag
accctggcggaagtcagtgttgaagaaattccgcgtttctccacagcctccggtgagctg
gaccgggtgctgggcggcggcctggtggacggctcggtggtgctgattggcggtgacccg
ggcatcggtaaatccacgatcctgctgcaaaccctgtgcagcatcgccagccgcatgccg
gcgctgtatgtcaccggtgaagaatcccagcagcaagtggccatgcgtgcgcgccgcctg
ggcctgccccaggaccaactgcgggtgatgaccgaaacctgcatcgaaagcatcatcgcc
accgcgcgcctggaaaagcccaaggtgatggtgatcgactcgatccagacgattttcacc
gaacaactgcaatcggctccgggtggcgtgtcccaggtgcgggaaagtgccgcgctgctg
gtgcgctatgcgaaacagagcggcacggcgattttcctggtgggccacgtgaccaaggaa
ggcgcgctggccggcccgcgggtgttggaacacatggtcgacaccgtgctgtatttcgaa
ggcgagtccgatgggcggttgcgtttgttgcgggcggtgaagaaccgttttggcgcggtc
aacgagctcggagtgttcgccatgactgaccggggcttgaaagaagtctccaacccgtcg
gcgatttttcttacccgtgcccaggaagaagtcccgggcagtgtggtgatggcaacgtgg
gaaggcacccgcccgatgctggtggaagtgcaggcgctggtggatgacagccacctggcc
aacccgcgccgcgtcaccctgggcctggatcagaaccgcctggcgatgttgctggcggtg
ctgcaccgccacggcggcattcccacccatgaccaggacgttttcctcaacgtggtgggc
ggggtcaaggtattggaaaccgcgtctgacttggcattaatggcggcagtgatgtccagc
ctgcgcaaccggccgttgccccacgacttgctggtgttcggcgaagtgggcctgtcgggt
gaagtgcgcccggtgcccagcggccaggagcgcctgaaggaagcggccaagcacggcttc
aagcgcgccatcgtgcccaagggcaatgcgccgaaagaaatgccaccggggctgcaagtg
atcggggtgacgcgcctggagcaggcgctggatgccctgttcgaatag
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