Pseudomonas yamanorum: AK972_0973
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Entry
AK972_0973 CDS
T05821
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pym
Pseudomonas yamanorum
Pathway
pym03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AK972_0973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_0973
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AK972_0973
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
Motif
Other DBs
NCBI-ProteinID:
AMW81773
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All DBs
Position
complement(1053575..1056166)
Genome browser
AA seq
863 aa
AA seq
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MSKNTSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQAIPMCGIPYHSLEGYLVKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFTVLEIKGWENLLAELERVNPVELM
IPDDWPKDLPAERRRGTKRRAPWDFERDSALKSLCQQFSVQDLKGFGCETLTLAIGAAGC
LLSYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ
TAMGSRLLTRWLNRPLRDLTVLQARQTSITCLLDQYRFEKLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALGALPQLQAAMTELEAPHLQQLAVTTSTYPELAALLEKAIIDNPPA
IIRDGGVLKTGYDTELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIEL
PSKQAEQAPIDYQRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYEALLEDLIG
KLAPLQDTAAALAELDVLSNLAERALNLDLNCPRFVSEPCMRIVQGRHPVVEQVLTTPFV
ANDLSLDDDTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH
LRAYTLFATHYFELTVLPENEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPSEVITRAREHLSRLEETALPHEIPVASPAKASNKPSAPHQSDMFASLPHPVLDELA
KLDVDDLTPRKALEMLYALKTRI
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaacacttccgatctgtcctcccacaccccgatgatgcagcagtactggcgc
ctgaaaaaccagcaccctgatcagttgatgttttaccgcatgggcgacttctacgagatc
ttctatgaagacgcaaagaaggccgccaagttgctggacatcaccctgaccgcgcgcggg
cagtcggccgggcaggcgattccgatgtgcgggattccctatcattcgttggaaggttac
ctggtcaagctggtgaagctgggcgagtcggtggtgatctgtgagcagatcggcgacccg
gccaccagcaagggcccggtggaacgccaggtggtgcgcatcattacaccggggacggtg
agtgatgaggcgctgctggatgagcgtcgcgacaacctgatcgcggcggtgctgggggat
gagcggctgttcggcctggccgtgctggacatcaccagtggcaatttcacggtgttggaa
atcaagggctgggaaaacctgctggcggagctggagcgcgtcaacccggtggagctgatg
attccggatgactggccaaaggatctgccggcggaacgtcgccgcgggaccaagcgtcgc
gcgccgtgggatttcgagcgtgattcggcgctgaaaagcctatgccagcaattctccgtg
caagacctcaagggttttggctgcgaaaccctgaccctcgctatcggcgccgccggttgc
ctgctcagctatgccaaggaaacccaacgcacggccctgccgcatttgcgcagcctgcgt
catgaacgtctggacgacaccgtggtgctcgatggcgccagccgtcgcaacctggaactg
gacaccaacctggcgggcggtcgcgacaacaccctgcaatcggtggtcgaccgttgccag
accgccatgggcagccgcttgctgacccgctggttgaaccgtccgctgcgggatttgacc
gtgctgcaagcccgtcaaacctctattacgtgcctgctggatcaataccgctttgaaaag
ctgcaaccgcagctcaaggaaatcggggatatcgagcggatcctggcgcggatcggcctg
cgcaacgcacggccccgcgacctggcacgcctgcgggatgccctcggcgccctgccgcaa
ctgcaagcagcgatgaccgaactggaagctccgcacctgcagcagcttgccgtcaccacc
agcacctacccggaactggcggcgctgctggaaaaagccatcatcgacaacccgcccgcg
atcatccgtgacggcggcgtcttgaagaccggttacgacaccgagctggacgaactgcaa
tccctgagcgagaacgccgggcagttcctgatcgacctggaagcccgcgaaaaagcccgc
accggcctggccaacctgaaagtcggctacaaccgtgtacatggctactttatcgagttg
ccgagcaagcaggccgagcaggcgccgatcgattaccagcgtcgccagaccctcaagggt
gccgagcgctttattaccccggaacttaaagagttcgaagacaaggcactgtcggccaaa
agccgcgccctggctcgggagaagatgctctacgaagccttgctcgaagacttgatcggc
aagctggcaccactccaggacaccgcggctgcgctggcggagctggacgtgctgagcaac
ctggccgagcgcgccctgaaccttgacctgaactgcccgcgttttgtcagcgagccgtgc
atgcgcatcgtgcaaggtcgccacccggtggtggagcaggttctgaccacgccgttcgtc
gccaacgatctgtcgctggacgacgacacccgcatgctggtgatcaccggtccgaacatg
ggcggtaaatccacctacatgcgtcagaccgcattaatcgtgctgctggcccatatcggc
agcttcgtgccggcggccagttgcgagctgtccctggtggaccgcatcttcacccggatc
ggctccagcgatgacctggccggtggccgttcgacctttatggtggaaatgagcgaaacc
gccaacatcctgcacaacgccaccgaacgcagcttggtactgatggacgaagtgggccgc
ggcaccagcacctttgacggcctgtccctggcctgggcggcggccgagcgattggcgcat
ctgcgggcgtatacgctgtttgcaacgcactatttcgagctgacggtgttgccggaaaac
gagccgctggtggccaacgtgcacctcaatgccaccgagcacaacgagcgcatcgtgttc
ctgcaccacgtgttgcccgggccggcgagccagagttacggcctggccgtggcgcagctg
gcgggcgtgccaagtgaggtgatcactcgcgcccgcgaacacctgagccgcctggaagaa
accgccctgccccacgagattcccgtggccagcccggccaaagccagcaacaaacccagt
gcgccacaccagagcgacatgttcgccagcctgcctcatccggtactggatgagttggct
aagcttgacgtggacgacttgaccccgcgaaaagcgctcgaaatgttatatgcactgaag
actcggatataa
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