Pseudomonas yamanorum: AK972_1089
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Entry
AK972_1089 CDS
T05821
Name
(GenBank) ATPase component BioM of energizing module of biotin ECF transporter
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_1089
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AK972_1089
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_16
ResIII
TrwB_AAD_bind
AAA_30
AAA_10
T2SSE
AAA_7
CbiA
AAA_19
SRP54
nSTAND3
Hydrolase
AAA_6
P-loop_TraG
AAA_28
AAA_5
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AMW81889
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Position
1169244..1170734
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AA seq
496 aa
AA seq
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MGDKMPDSSQLIIGADLQGQPIAQSMRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVA
VFAADIKGDLCGLGAAANPQGKVAERIAGMPFLNYTPKAYPVTLWDIHGQSGHPLRTTMS
EMGPLLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLRYHPELLGEDAA
LMTTGSSQALLRRLAVLEQQGAEALFGEPALQLEDILQPANDGRGRIHLLDASRLVHEAP
KVYATFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFADTPKALQDRLEQVVRLIRS
KGVGVYFVTQSPGDLPDTVLAQLGLRIQHGLRAFTTKEQKSLRAVADGFRPNPAFDALAV
LTELGTGEALVGTLQEKGTPEVVQRVLVAPPQSRIGPLSEAERAALIASSPLLGRYDKPI
DRESAYEVLMARKDLGPQEEAAPAAEEPSFTDKAGAFLGTTAGKALKSAMQQAANQMGRQ
LVRGLLGSLLGGSKRK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaaatgcctgactcctcgcaactcattattggtgcagatcttcaaggtcag
ccgatcgcccagtcgatgcgcctggccaaccgccacggcctgatcgcgggtgctaccggt
accggcaagaccgtcacgttgcagcgcctggcggaagccttcagcgatgccggtgtcgcg
gtgtttgccgccgacatcaagggcgatctgtgtggcctgggcgccgcggccaaccctcag
ggcaaggttgccgagcggattgccggcatgcctttccttaattacacgcccaaggcgtat
ccggtgacgttgtgggatatccacggccagtccggtcatccgctgcgtaccaccatgagt
gaaatgggcccgctgttgctcggcagcctgttggaactcaccgacagtcaacaatcagcg
ctttatgcggcctttaaggtggccgaccgcgaaggtctgttactgctggacctcaaggac
ctcaaggcgctgctcaatcatttgcgctaccacccggaattgctgggggaagacgcggcc
ttgatgaccaccggttccagccaggcgctattgcggcgcctggcagtgctggaacagcag
ggtgccgaagcgttgttcggcgagccggcgttgcaactggaagatatcctgcagcccgcc
aatgacgggcgcggtcgtattcatttgttggacgccagccggctggtgcatgaggcaccg
aaggtgtacgcgaccttcctgctctggctgttggccgaactgtttgagcaactaccggag
cgcggtgatgccgacaagccgctgctggcgctgtttttcgatgaggcgcatctgttattc
gccgatactccaaaagccctgcaggatcgcctggaacaagtggtgcggctgattcgttcg
aaaggggtcggtgtgtatttcgtcacccagtctccgggagacctgccggacacggtactg
gcgcaactaggcttgcgcatccagcacggcctgcgggcattcaccaccaaagagcagaaa
tccctgcgagccgtggccgatggcttccgccctaacccggcgtttgatgcgctggcggtg
ctgaccgaattgggaacgggtgaggcgctggtgggaaccttgcaggaaaaggggacgcct
gaggtagtccaacgcgtactggtggcgccgccgcaatcgcggatcgggccgttgagcgaa
gccgagcgggcggcgttgattgccagttcgccgttgctggggcgctatgacaagccgatt
gatcgagagtcggcgtacgaagtgttgatggcccgcaaggacctggggccgcaggaggag
gcggcgcccgctgctgaagaaccgagttttaccgacaaggccggcgcgttcctggggact
acggcaggcaaggcactgaagtcggcgatgcaacaggcggccaatcagatgggccggcaa
ttggtgcgcgggttactcgggtcgttgttgggtggcagcaagcgtaaataa
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