Pseudomonas yamanorum: AK972_1201
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Entry
AK972_1201 CDS
T05821
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00061
Fatty acid biosynthesis
pym00071
Fatty acid degradation
pym01100
Metabolic pathways
pym01212
Fatty acid metabolism
pym02024
Quorum sensing
pym04146
Peroxisome
Module
pym_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AK972_1201
00071 Fatty acid degradation
AK972_1201
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AK972_1201
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_1201
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pym01004
]
AK972_1201
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pym04147
]
AK972_1201
Enzymes [BR:
pym01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AK972_1201
Lipid biosynthesis proteins [BR:
pym01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AK972_1201
Exosome [BR:
pym04147
]
Exosomal proteins
Exosomal proteins of breast milk
AK972_1201
Exosomal proteins of breast cancer cells
AK972_1201
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMW82001
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All DBs
Position
1286793..1288481
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AA seq
562 aa
AA seq
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MQPDFWNDKRASGVPSEIDLSAYKSVIEVFERSCKTFADRPAFSNMGITLTYAELDRRSA
AFAGYLQGHTDLKPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD
AGIRALVYLNLFGSRVEEVSKDTEIEYLIEAKMGDFMPAAKGWLINTVVDKVKKMVPAYN
LPQAISFKRALHMGAGQALIRHPVTLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACMSQLGDDGHPLIKEGQEVMVAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIGGFI
KELKKWRFTGILGLNTLFVALMDHPDFKTLDFSHLKLTNSGGTALVKATAERWQQLTGCA
IGEGYGLTETSPVASTNPYGGKSKLGTVGIPVPGTAMKVIDDNGVELPLGERGELCIKGP
QVMKGYWQQPVATAETLDAEGWLKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPAVASCAVIGVPDERTGEAVKLFVVARAQGVSLEELKTYCKANFTGYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcgcgtccggggtgcccagcgagatcgacctg
agcgcctacaagtcggtgatcgaagtcttcgagcgttcctgcaagacctttgccgatcgt
ccggcgttcagcaacatggggatcactctgacatacgccgagctggaccggcgcagtgcc
gcgttcgccggttacctgcaagggcacaccgacctcaagccgggtgaccgcattgcggtg
cagatgcccaacgtcctgcattatccgattgccgtgttcggcgccctgcgcgccgggctg
atcgtggtcaacaccaaccctctgtacaccccgcgggagatgcgtcaccagttcaaggac
gccggcattcgtgcattggtgtacctcaatctgttcggctcgcgggttgaagaagtcagc
aaagacaccgagatcgagtacctgatcgaagcgaaaatgggcgacttcatgcccgccgcc
aagggctggctgatcaacaccgtggtcgacaaggtcaagaagatggtcccggcctataac
ctgccccaggccatctcgttcaagcgtgccctgcacatgggcgctggccaggcgctcata
cgccacccggtgaccctcgacgacatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgccatgctcacccacggcaacctggtggccaacatgcagcaagtgcgg
gcgtgcatgtcgcaactgggggacgacggccatccgctgatcaaggaagggcaggaggtg
atggtcgcgccgctgccgctgtaccacatctatgccttcaccgcgaattgcatgtgcatg
atggtgtccggcaaccacaacgtgctgatcaccaatccccgggacattggcggctttatc
aaggagctgaaaaagtggcgcttcaccgggattctggggctcaacacgctgtttgtggcg
ttgatggaccatccggatttcaagaccctggacttctcccacctcaagctcaccaactcc
ggcggtaccgcgttggtcaaggcgacggccgagcgctggcagcaactgaccggctgtgcg
attggtgaaggctacggcctcaccgaaacctcaccggtggccagcaccaacccctatggc
ggcaaatcgaagctgggtaccgtaggcattccggtaccgggcacggcgatgaaagtcatc
gacgacaacggcgtggagttgccgctgggcgagcggggcgagttgtgcatcaagggcccg
caagtgatgaaaggctactggcagcaaccggtggcgaccgccgagaccctggacgccgaa
ggctggctcaagaccggcgatatcgcggtgatcgacccggacggctttgtgcgcatcgtt
gatcgcaagaaggatttgatcatcgtctcggggttcaacgtgtaccccaacgagatcgaa
gacgtggtgatggcgcatccagcggtggccagctgcgcagtgatcggcgtaccggacgag
cgtaccggcgaggcggtgaagctgtttgtggtggcccgtgcccaaggcgtgagccttgaa
gagctgaagacctactgcaaggccaacttcactggctacaaggtgcccaagcacattgtg
ttgcgtgagtcgttgccgatgacgccggtgggcaagatcttgcggcgcgagcttcgcgac
atcgcctga
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