Pseudomonas yamanorum: AK972_1202
Help
Entry
AK972_1202 CDS
T05821
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00061
Fatty acid biosynthesis
pym00071
Fatty acid degradation
pym01100
Metabolic pathways
pym01212
Fatty acid metabolism
pym02024
Quorum sensing
pym04146
Peroxisome
Module
pym_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AK972_1202
00071 Fatty acid degradation
AK972_1202
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AK972_1202
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_1202
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pym01004
]
AK972_1202
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pym04147
]
AK972_1202
Enzymes [BR:
pym01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AK972_1202
Lipid biosynthesis proteins [BR:
pym01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AK972_1202
Exosome [BR:
pym04147
]
Exosomal proteins
Exosomal proteins of breast milk
AK972_1202
Exosomal proteins of breast cancer cells
AK972_1202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AMW82002
UniProt:
A0AAJ3H1T1
LinkDB
All DBs
Position
1288860..1290551
Genome browser
AA seq
563 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAIKFNDVLAKGHGQPVNEVSPDASDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLSAMVKELSKWK
FSGFVGLNTLFVALCNNDAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCSICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCKVITDDGVELALGEVGELCVKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEHIKIFIVVKPGATLTKDQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtaccccgccgggattgctgcagaaatcaatcca
gacgagtatccgaatattcaggcggtactgaaacagtcctgccaacgcttcgccaacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgaactgtacgaactgtccggc
gcctttgccgcctacctgcaacagcataccgacttgcagcccggtgatcgaatcgccgtg
caattgcccaacgtcctgcaatacccggtcgccgtattcggtgccatccgtgccggcttg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccaattcaacgac
tccggtgccaaggccctggtttgcctggccaacatggcgcacctggctgaaaaagtcgtg
cccaagacttccgtcaagcacgtgatcgtcaccgaagtcgccgacctgttgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtcccggcttatcac
ttgcccaaggccatcaagttcaacgacgtcctggccaagggccacggccagccggtgaac
gaagtcagccccgacgccagtgacgtggccgtgctgcaatataccggcggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctcgtcgccaacatgctgcagtgcaag
gcgctgatgggctccaacctcaatgaaggctgcgagatcctgattaccccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgtcggcgatggtcaaggaactgtcgaagtggaag
ttcagcggctttgtcggcctgaacaccctgtttgttgcgctgtgcaacaacgacgccttc
cgcaagctggatttctcggcgctgaaagtcaccctgtcgggtggcatggccctgcaactg
gcggcggccgagcgctggaaagcggttaccggctgctccatctgcgaaggttacggcatg
accgaaaccagcccggtggccaccgtgaacccgatccagaacatccagatcggcaccatc
ggcatcccggtgccgtcgaccctgtgcaaggtcatcaccgatgacggcgtcgagctggcg
ctgggtgaagtgggcgagctgtgcgtcaagggcccgcaagtgatgaagggctattggcag
cgcgaagacgccactgccgagatcctcgacagcgaaggctggctgaagaccggtgacatc
gcgatcatccagcccgatggctacatgcgcattgtcgaccgcaagaaggacatgatcctg
gtctccggtttcaacgtgtaccccaacgagctggaagacgtgctggcgaccctgccgggc
gtgctgcaatgtgcggccattggtgtgccggacgagaagtccggggaacacatcaagatc
ttcatcgtggtcaagcccggtgccactctgaccaaagaccaggtgatggagcacatgcgt
gccaacgtcaccggctacaaggtgcccaaggccgtggagttccgcgatgcgctgccgacc
accaacgtgggcaagatcctgcgtcgtgaactgcgggacgaagaactgaaaaagctgggt
ttgaagaagtaa
DBGET
integrated database retrieval system
