KEGG   Pseudomonas yamanorum: AK972_1322
Entry
AK972_1322        CDS       T05821                                 
Name
(GenBank) Ribonucleotide reductase of class Ia (aerobic), alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pym  Pseudomonas yamanorum
Pathway
pym00230  Purine metabolism
pym00240  Pyrimidine metabolism
pym01100  Metabolic pathways
pym01232  Nucleotide metabolism
Module
pym_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pym_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pym00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    AK972_1322
   00240 Pyrimidine metabolism
    AK972_1322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pym03400]
    AK972_1322
Enzymes [BR:pym01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     AK972_1322
DNA repair and recombination proteins [BR:pym03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    AK972_1322
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AMW82122
UniProt: A0A143GD03
LinkDB
Position
complement(1408875..1411772)
AA seq 965 aa
MQTDTTRENPQGSVPQAADSNLDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAV
EGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEEIQDQVELALMRAGEQKVARD
YVIYRDSRAKERAVRSPAEEAAVQAHPSIRITLADGTFAPLDLGRLNTIITEACEGLEEV
DGDLIQRETLKNLYDGVALTDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFL
GVADSATHHEMADLYAKALPAYIAKGIEFELLNPILATFDLEKLGKAINHERDQQFTYLG
LQTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPT
LFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGT
NGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTH
DMNTANWIPDLFMKRVFDDGPWTLFSPSEVPDLHDLTGKAFEERYEYYEALSQYPGKIKL
FKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDE
IAVCNLGSINLPNHIVNGKLDTAKLERTVNTAVRMLDNVIDINYYSVPQAQNSNFKHRPV
GLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLW
SKGILPLDSQQILIEQRGQKYIDVDLNESLDWAPVRARVQKGIRNSNIMAIAPTATIANI
TGVSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIE
RIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYR
GLKTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPD
CEACQ
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgcaaaccgacacaactcgcgagaacccgcaaggctccgtgccgcaggccgccgattcg
aacctggatctgtccgccaccgcgcccggccaactgcgtgtgatcaagcgtaacggcact
gtcgttccttacaccgatgacaaaatcaccgtcgcgatcaccaaagcgtttcttgcagtt
gaaggcggcaccgctgctgcctcgtcgcgcatccacgacaccgttgcgcgcctgaccgaa
caggtcaccgcaacgttcaagcgtcgcatgccatcgggcggcaccatccacatcgaagaa
atccaggaccaggtcgaactggccctgatgcgtgccggcgagcagaaagttgcccgcgac
tacgtgatctaccgtgactcccgcgccaaggaacgtgccgtacgttccccggctgaagaa
gctgccgtacaagctcacccgtcgatccgcatcaccctggccgacggtacgtttgcaccg
ctggacctgggccgcctgaacaccatcatcaccgaggcctgcgaaggcctggaagaagtc
gatggcgacctgatccagcgcgaaaccctgaagaacctgtacgacggcgtggccctgacc
gacgtcaacaccgccctggtgatgaccgcccgtaccctggttgagcgtgagccgaactac
tcgttcgtgaccgcgcgcctgctgatggacaccctgcgtgccgaaggcctgggcttcctc
ggcgtcgccgacagcgccacgcaccacgagatggccgacctgtatgccaaggccctgcct
gcctacattgccaagggtatcgaattcgaattgctgaacccgatcctggccaccttcgac
ctggaaaaactcggcaaggcgatcaaccacgagcgcgaccagcagttcacctacctgggc
ctgcaaaccctgtacgaccgttacttcatccacaaggacggtatccgcttcgaactgccg
caagtgttcttcatgcgcgtggccatgggcctggcgatcgaagagaagcagaaagaagac
cgtgccatcgagttctacaacctgttgtcgtccttcgactacatgtcgtcgaccccgacc
ctgttcaacgccggcaccctgcgtccacagctgtcgagctgctacctgaccaccgtgccg
gacgacctgtcgggcatctaccacgcgatccacgacaacgccatgctgtccaaattcgcg
ggcggcctgggtaacgactggacgccggtgcgtgcactgggttcctacatcaagggcacc
aacggcaagtcccaaggcgttgtaccgttcctcaaagtagtgaacgacaccgctgtagcc
gtgaaccagggtggcaagcgcaaaggcgctgtgtgtgcctacctggaaacctggcacatg
gacatcgaagagttcatcgaactgcgcaagaataccggtgatgatcgtcgtcgtacccac
gacatgaacaccgccaactggatcccagacctgttcatgaagcgtgtcttcgatgacggc
ccgtggaccctgttctcgccatccgaagtgcccgacctgcacgacctgaccggcaaggcc
ttcgaagagcgttacgagtactacgaagccctgtcccagtacccaggcaagatcaagctg
ttcaagaccatccaggccaaagacctgtggcgcaaaatgctgtccatgctgtttgaaacc
ggccacccatggctgaccttcaaagacccgtgcaacctgcgcagcccgcagcagcacgtg
ggcgtggtccacagctcgaacctgtgcaccgagatcaccttgaacaccaacaaggacgag
atcgccgtttgcaacctgggctcgatcaacctgccgaaccacatcgtcaacggcaagctg
gacaccgccaagctggaacgcaccgtgaacaccgccgttcgcatgctcgataacgttatc
gacatcaactactactcggtaccacaggcgcagaactccaacttcaagcaccgtccggtg
ggcctgggcatcatgggcttccaggacgcgctgtacctgcagcacattccttacggttcg
gacgctgcggtcgagttcgccgacaagtccatggaagcggtcagctactacgcgatccag
gcttcctgcgacctggccgacgagcgcggcgcctacgagacgttccagggttcgctgtgg
tccaaaggcatcctgccgctggattcgcaacagatcctgatcgagcagcgtggccagaag
tacatcgacgttgacctgaacgaatccctggactgggcaccggtacgtgcccgtgtgcag
aaaggcattcgtaactccaacatcatggccatcgcaccgaccgcgaccatcgccaacatc
accggcgtatcgcagtcgatcgaaccgacctaccagaacctgtatgtgaaatcgaacctg
tcgggcgaattcaccgtgatcaacccgtacctggttcgcgacctgaaagcccgcggcctg
tgggactcggtgatgatcaacgacctgaagtactacgatggttcggtgcagcagatcgag
cgcatcccgcaagaactcaaagagctctacgcgactgccttcgaagtggacaccaagtgg
atcgttgacgccgccagccgtcgccagaagtggatcgaccaggctcagtcgctgaacctg
tacatcgccggcgcatcgggcaagaagctggacgtgacctaccgcatggcttggtaccgt
ggcctgaaaaccacttactacctccgtgccctggccgccaccagcaccgagaagtcgacc
atcaacaccggcaagctgaacgctgtttccagcggcggcaaccacggtgatgattcggtt
ctcgccgcacctgccggtccagcgccagtgccaaaagcctgcgcgatcgacgagccggat
tgcgaagcttgccaataa

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