Pseudomonas yamanorum: AK972_1417
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Entry
AK972_1417 CDS
T05821
Name
(GenBank) Enoyl-CoA hydratase isoleucine degradation
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00071
Fatty acid degradation
pym00280
Valine, leucine and isoleucine degradation
pym00310
Lysine degradation
pym00362
Benzoate degradation
pym00380
Tryptophan metabolism
pym00410
beta-Alanine metabolism
pym00640
Propanoate metabolism
pym00650
Butanoate metabolism
pym00907
Pinene, camphor and geraniol degradation
pym00930
Caprolactam degradation
pym01100
Metabolic pathways
pym01110
Biosynthesis of secondary metabolites
pym01120
Microbial metabolism in diverse environments
pym01200
Carbon metabolism
pym01212
Fatty acid metabolism
Module
pym_M00087
beta-Oxidation
pym_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AK972_1417
00650 Butanoate metabolism
AK972_1417
09103 Lipid metabolism
00071 Fatty acid degradation
AK972_1417
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AK972_1417
00310 Lysine degradation
AK972_1417
00380 Tryptophan metabolism
AK972_1417
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AK972_1417
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AK972_1417
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AK972_1417
00930 Caprolactam degradation
AK972_1417
Enzymes [BR:
pym01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AK972_1417
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AK972_1417
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AK972_1417
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
AlaDh_PNT_C
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AMW82217
LinkDB
All DBs
Position
1498383..1500530
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AA seq
715 aa
AA seq
DB search
MTDAIRYEKGQDQIVVLTIDMPGQSANTMNGVYREAMAATVARLDAEKDSIAGVIITSAK
KTFFAGGDLNELIKVDKPHAKDFYASVLVLKAQLRALETLGKPVVAAINGAALGGGWEIC
LACQHRVALDHKSVQIGLPEVTLGLLPGGGGVVRMVRMLGLEKALPYLLEGKKATPQQAL
QAGLIDELATDRDELLAKSRAWILANPEAKQRWDIKGYQIPGGTPSNPKVAQMLAIAPSI
LRAKTNGCFPAPEKILCAAVEGAQVDFDTAHLIETRYFTELVTGQVAKNMIGTFWFQLNE
INAGSSRPKGFAPYVTRKVGVLGAGMMGAGIAYVSASAGVEVVLKDVNLAAAEKGKAHSA
ALLDKKVGRGQLTTEQRETILARIIPTESDADLAGCDLIIEAVFEDRELKAKVSAAAQSV
VGADAVIASNTSTLPISGLATAVPDQGKFIGLHFFSPVDKMPLVEIIKGTHTSDETLARG
FDFVLQIKKTPTVVNDSRGFFTSRVFGTFTNEGIAMLGEGVAAPMIETEARKAGMPVGPL
AVSDEVSLSLMSHIRQQTAKDLQAEGKPLPQHPAFAVIDLLLNEYQRPGKAAGGGFYDYP
AGGQKHLWPELKSRFEKPEQRISAQDVRDRLIFIQAIETVRCVEEGVLMSTADANVGSIF
GIGFAAWSGGTLQFINQYGLNDFLARARYLAEQYGERFTPPALLLEKAAQGEAFR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccattcgttacgaaaaaggccaggaccagatcgtggtgctgaccatcgac
atgcccggccagagcgccaacaccatgaacggggtgtaccgcgaggccatggcggccacc
gttgcccgcctggacgccgaaaaggattcgattgcgggcgtgatcatcacctcggcgaaa
aagaccttctttgccggcggtgacctcaatgaactgatcaaggtcgacaagccccacgcc
aaggatttctacgccagcgtgctggtgctgaaggcgcaactgcgcgccctggaaaccctc
ggcaaaccggtagtggccgccatcaacggcgcggcattgggcggtggctgggagatttgc
ctggcgtgccagcaccgcgtggcgctggaccacaagtcggtacagatcggcctgccggaa
gtcaccctcggcctgctgccgggcggcggcggtgtcgtgcgcatggtgcgtatgctcggg
ctggaaaaggctttgccctacttgctggaaggcaaaaaggctacgccgcaacaggcgctg
caagctggattgattgatgagctggcgacagatcgagacgagctgctggccaagtcccgg
gcgtggattctggccaaccccgaggcgaaacagcgttgggacatcaagggttatcagatc
cctggcggcacgccttccaacccgaaagtcgcgcaaatgctcgctattgcgccatcgatc
ctgcgcgccaaaaccaacggctgcttcccggccccggagaaaatcctctgcgccgccgtg
gaaggtgcccaggtggatttcgacaccgcccacctgatcgaaacccgctacttcaccgag
ctggttacggggcaagtggcgaaaaacatgattggcaccttctggttccagctcaatgaa
atcaacgcgggtagctcgcgacccaagggctttgcgccgtatgtgacacgcaaggtcggc
gtgcttggcgccgggatgatgggggcgggcattgcttatgtcagcgcctcggcgggcgtt
gaggtggtgctgaaggacgtcaacctggcggcggcggagaagggcaaggcccattcggca
gcgttgctcgacaagaaggtcggccgtgggcaattgaccactgagcagcgggaaaccatc
ctcgcgcggattattcctaccgaatccgatgccgacctcgccggctgcgacctgatcatc
gaagccgtcttcgaagaccgggaactcaaggccaaggtctcggccgctgcgcagagcgtg
gtgggggccgacgcagtcatcgcctccaacacctccaccttgcccatcagcggcctggcc
acggcggtgcccgaccagggaaagtttatcggcctgcacttcttcagcccggtggacaaa
atgcccctggtggaaatcatcaagggtacccacaccagcgacgaaaccctggcccgaggt
ttcgatttcgtcctgcaaatcaagaaaaccccgactgtggtcaacgacagtcgcggcttc
ttcacctcgcgtgtgttcggcaccttcaccaacgaaggcatcgccatgctcggcgaaggg
gtcgccgcgccgatgatcgagaccgaggcacgcaaggccggcatgcctgtgggaccgctg
gcagtctctgatgaagtttccctcagcctgatgagccatatccgccagcagacggccaag
gacctacaggccgagggcaagccgttaccccagcatccggcatttgccgtgatcgacctg
ttgctcaacgaataccaacgcccgggcaaggccgctgggggcggcttctacgattacccg
gcgggcgggcagaaacacctgtggccggagctgaaaagccgctttgaaaagcccgagcaa
cggatctcggcccaggacgtacgtgaccgcttgatattcatccaggccattgaaaccgtg
cgctgtgtggaggagggcgtgttgatgtcgacggcggatgccaacgtcggctcgatcttc
ggtatcggttttgccgcctggagtggcgggacgctgcaattcatcaaccagtacggcctg
aacgacttcctcgcccgtgcccgttacctggccgagcaatacggtgagcgcttcacacca
ccggcgctgctgttggagaaagccgcacagggtgaagcgtttcggtga
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